FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ECOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.479e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ECO7I (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.479e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHISS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella sonnei (strain Ss046) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHIFL (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella flexneri GN=pckA PE=3 SV=4)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHIF8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella flexneri serotype 5b (strain 8401) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHIDS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQRLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHIBS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella boydii serotype 4 (strain Sb227) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHIB3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 94/216 (43.52%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHILW (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 93/213 (43.66%), Postives = 130/213 (61.03%), Query Frame = 2 
Query:   11 HRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            H +  R+V+  A+HSLF+ N+ IRP +  L  F  P  TI +   F  +   H   S T I  +L    ++I GT YAGEMKK +F++++YL+P + ++ +H   N+G +GD A               D  R LIGDDEH WS+NG+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V +E  RE ++ D S+TENTR AYP+++I
Sbjct:  120 HALPTRVVTEFAWHSLFIRNLLIRPDAAALPSFA-PKLTIIDLPSFKADPARHGCRSETVIACDLTNGLVLIGGTSYAGEMKKSVFTVLNYLLPAKGVMPMHCSANVGPNGDAAVFFGLSGTGKTTLSADPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNER-REPNFDDGSLTENTRCAYPMDFI 330
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEFS (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas fluorescens (strain SBW25) GN=pckA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 86/213 (40.38%), Postives = 127/213 (59.62%), Query Frame = 2 
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +H + V++ +  A+ +LF   + I P   +    G  ++ + N   F C        S   + +N A+K+++I G +YAGEMKK +FS+ ++L+P   +L +H   N+G+ GDV                D +RYLIGDDEH W +  V NIEGGCYAKCIDLS + EP IW AIK G VLEN+V D+  +  DY + S+T+N+RAAYP+E++
Sbjct:  104 DHYLAVKMTTQTAWQNLFGRCLFINPA--KYNPAGRDEWQVLNVANFECVPERDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPASDVLPMHCAANIGEAGDVTLFFGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNIEGGCYAKCIDLSEKNEPVIWKAIKHGAVLENVVIDD-AKHADYTNVSLTQNSRAAYPLEHV 313
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ECOSM2.479e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO7I2.479e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_SHISS3.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIFL3.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIF83.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIDS3.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIBS3.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_SHIB33.238e-4343.52Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]
PCKA_RHILW3.238e-4343.66Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_PSEFS3.238e-4340.38Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudom... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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