FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ERWT9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pckA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.230e-42
Identity = 96/218 (44.04%), Postives = 126/218 (57.80%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNR---YTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP    L  F  PDF + N  +  C      +  + S   +  NL  K  +I GT Y GEMKKGLF++M+YL+P + I S+H   N+G DGDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS + EP+I+ AI+   +LEN+V   H   VDY D S TENTR +YPI +I
Sbjct:  127 NPDSRLSVRFITEVAWQAHFVKNMFIRPDDASLASF-KPDFVVMNGAK--CTNPDWQSQGLHSENFVAFNLTEKIQLIGGTWYGGEMKKGLFAIMNYLLPLKGIASMHCSANVGADGDVAVFFGLSGTGKTTLSTDPQRQLIGDDEHGWDDDGVFNFEGGCYAKTIKLSPQAEPEIYQAIRRDALLENVVV-RHDGSVDYDDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.230e-42
Identity = 98/214 (45.79%), Postives = 125/214 (58.41%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + R  VR V+  A+ + F+ NM IRP+ EELE+F   DF +YNA +     Y    + S   +  N+     VI GT Y GEMKKG+FS+M+Y +P    LS+H   N+G+ GDVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I
Sbjct:  111 QSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ECO5E (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.607e-42
Identity = 93/216 (43.06%), Postives = 129/216 (59.72%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+ + GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVSEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ECO57 (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O157:H7 GN=pckA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.607e-42
Identity = 93/216 (43.06%), Postives = 129/216 (59.72%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+ VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+ + GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+   +LEN+   E    +D+ D S TENTR +YPI +I
Sbjct:  128 NPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVSEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGTIDFDDGSKTENTRVSYPIYHI 341          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALG2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pckA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.580e-42
Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+ VR ++  A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   + +NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVALNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALAR (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=pckA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.580e-42
Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R+ VR ++  A+ + F+ NM IRPT EEL +F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+   +LEN+   E    VD+ D S TENTR +YPI +I
Sbjct:  131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVNF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPY (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=pckA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R++VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pseudotuberculosis GN=pckA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R++VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPP (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis (strain Pestoides F) GN=pckA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R++VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPN (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pckA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R++VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_ERWT91.230e-4244.04Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia... [more]
PCKA_CAMJD1.230e-4245.79Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_ECO5E1.607e-4243.06Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO571.607e-4243.06Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_SALG23.580e-4244.34Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALAR3.580e-4244.34Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_YERPY4.675e-4244.81Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]
PCKA_YERPS4.675e-4244.81Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]
PCKA_YERPP4.675e-4244.81Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]
PCKA_YERPN4.675e-4244.81Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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