FC931551
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPE (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R++VR ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK +LEN+V VD+ D S TENTR +YPI +I
Sbjct: 131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R++VR ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK +LEN+V VD+ D S TENTR +YPI +I
Sbjct: 131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R++VR ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK +LEN+V VD+ D S TENTR +YPI +I
Sbjct: 131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERP3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R++VR ++ A+ + F+ NM IRP+ EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK +LEN+V VD+ D S TENTR +YPI +I
Sbjct: 131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PASMU (Phosphoenolpyruvate carboxykinase [ATP] OS=Pasteurella multocida GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 97/212 (45.75%), Postives = 122/212 (57.55%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R+ VRIV+ A+ + F+ NM IRPT EL F PDF + N + + + S + NL +I GT Y GEMKKG+FS+M+Y +P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS E EPDI+ AIK +LEN+V VDY D S TENTR +YPI +I
Sbjct: 130 RLSVRIVTEVAWQAHFVKNMFIRPTEAELVGF-KPDFVVMNGSKVTNPNWKEQGLNSENFVAFNLTEGVQLIGGTWYGGEMKKGMFSMMNYFLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGVFNYEGGCYAKTIKLSPENEPDIYKAIKRDALLENVVV-RADGSVDYDDGSKTENTRVSYPIYHI 339
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_HAEIN (Phosphoenolpyruvate carboxykinase [ATP] OS=Haemophilus influenzae GN=pckA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 96/215 (44.65%), Postives = 127/215 (59.07%), Query Frame = 2
Query: 8 EH-RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
EH RI VRIV+ A+ + F+ NM IRPT E+L++F PDF + N + + + S + NL + +I GT Y GEMKKG+ S+M+Y +P + + ++H N+GKDGDVA D R LIGDDEH W D G+ N EGGCYAK I LS E EPDI+ AI+ +LEN+V VD+ D S TENTR +YPI +I
Sbjct: 127 EHDRIAVRIVTEVAWQAHFVKNMFIRPTEEQLKNF-EPDFVVMNGSKVTNPNWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMSSMMNYFLPLKGVGAMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRELIGDDEHGWDDVGIFNFEGGCYAKTIHLSEENEPDIYRAIRRDALLENVVV-RSDGSVDFDDGSKTENTRVSYPIYHI 339
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALTY (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhimurium GN=pckA PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R+ VR ++ A+ + F+ NM IRPT EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+ +LEN+ E VD+ D S TENTR +YPI +I
Sbjct: 131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALTI (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhi GN=pckA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R+ VR ++ A+ + F+ NM IRPT EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+ +LEN+ E VD+ D S TENTR +YPI +I
Sbjct: 131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALSV (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella schwarzengrund (strain CVM19633) GN=pckA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R+ VR ++ A+ + F+ NM IRPT EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+ +LEN+ E VD+ D S TENTR +YPI +I
Sbjct: 131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SALPK (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A (strain AKU_12601) GN=pckA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 2
Query: 14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
R+ VR ++ A+ + F+ NM IRPT EEL F PDF + N + ++ + S + NL + +I GT Y GEMKKG+FS+M+YL+P + I S+H N+G+ GDVA D R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+ +LEN+ E VD+ D S TENTR +YPI +I
Sbjct: 131 RLSVRFITEVAWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHI 340 The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bpback to top |