FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_AGRVS (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pckA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42
Identity = 92/216 (42.59%), Postives = 126/216 (58.33%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  + +  R+V+  A+HSLF+ N+ IRP    L DF    FTI +   F  +   H   + T I  +     ++I GT YAGEMKK +F+ ++Y++P +Q++ +H   N+G  GD A               D  R LIGDDEH W ++G+ N EGGCYAK I LS E EP+I+   K FGTVLEN+V DE+ R  D+ D S TENTR AYP+ +I
Sbjct:  117 DAANALPTRVVTELAWHSLFIRNLLIRPERAALADFEAK-FTIIDLPSFKADPARHGCRTETVIACDFTNNIVLIAGTYYAGEMKKSVFTALNYMLPAKQVMPMHCSANVGPAGDSAVFFGLSGTGKTTLSADPARTLIGDDEHGWGEDGIFNFEGGCYAKTIRLSAEAEPEIYATTKRFGTVLENVVLDEN-RVPDFNDGSKTENTRCAYPLNFI 330          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SODGM (Phosphoenolpyruvate carboxykinase [ATP] OS=Sodalis glossinidius (strain morsitans) GN=pckA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 96/214 (44.86%), Postives = 125/214 (58.41%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + R++VR V+  A+ + F+ NM IRP+ EEL DF  PDF + N  +     +    + S   +  NL     +I GT Y GEMKKGLFS+M+YL+P + I S+H   N+G D DVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EP+I+ AI+   +LEN+V       VDY D S TEN R +YPI++I
Sbjct:  129 DSRLRVRFVTEVAWQAHFVKNMFIRPSDEELRDF-EPDFVVLNGAKCTNPDWREQGLHSENFVAFNLTEGIQLIGGTWYGGEMKKGLFSVMNYLLPLKGIASMHCSANVGTDDDVALFFGLSGTGKTTLSTDPRRRLIGDDEHGWDDDGVFNFEGGCYAKTIRLSPEAEPEIYQAIRRNALLENVVV-RADGSVDYDDGSKTENARVSYPIDHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_RHILO (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium loti GN=pckA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 89/216 (41.20%), Postives = 130/216 (60.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIW-NAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D E ++  R+++  A+HSLF+ N+ IRP   EL  F  P+ TI +   F  +   H   + T I ++L R+ ++I GT YAGEMKK +F++++Y++P++ ++ +H   N G  GD A               D +R LIGDDEH W  +G+ N EGGCYAK I LS E EP+I+    +FGTVLEN+V D      D+ D  +TENTR AYP+++I
Sbjct:  117 DAELKLPTRVITEFAWHSLFIRNLLIRPDKAELGQF-VPEMTIIDLPSFRADPARHGSRTETVIAVDLTRQIVLIGGTSYAGEMKKSVFTMLNYILPQKGVMPMHCSANEGPAGDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWGPHGIFNFEGGCYAKTIKLSAEAEPEIFATTQRFGTVLENVVLDA-DGVPDFNDGRLTENTRCAYPLDFI 330          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CAMLR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=pckA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 95/212 (44.81%), Postives = 123/212 (58.02%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R  VR V+  A+ + F+ NM IRP  EEL  F  PDF +YNA +     Y    + S   +  N+ +   VI GT Y GEMKKG+FS+M+Y +P    L +H   N+G+ GDVA               D  R LIGDDEH W D GV N EGGCYAKCI+L  + EP+I+ AIK   +LEN+V  +    VD+ + S TENTR +YPIE+I
Sbjct:  113 RKAVRFVTQIAWQAHFVKNMFIRPKEEELSGF-KPDFVVYNACKCVNEDYEKDGLNSEVFVIFNIEKNIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLPMHCSANVGEKGDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKCINLDPQSEPEIYGAIKQNALLENVVLKDDL-SVDFNNGSKTENTRVSYPIEHI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 97/214 (45.33%), Postives = 124/214 (57.94%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + R  VR V+  A+ + F+ NM IRP+ EELE+F   DF +YNA +     Y    + S   +  N+     VI GT Y GEMKKG+FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I
Sbjct:  111 QSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJE (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni GN=pckA PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 97/214 (45.33%), Postives = 124/214 (57.94%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + R  VR V+  A+ + F+ NM IRP+ EELE+F   DF +YNA +     Y    + S   +  N+     VI GT Y GEMKKG+FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I
Sbjct:  111 QSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42
Identity = 97/214 (45.33%), Postives = 124/214 (57.94%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            + R  VR V+  A+ + F+ NM IRP+ EELE+F   DF +YNA +     Y    + S   +  N+     VI GT Y GEMKKG+FS+M+Y +P    LS+H   N+G+  DVA               D  R LIGDDEH W D GV N EGGCYAK I+L  E EP+I+ AIK   +LEN+V     + VDY D S TENTR +YPIE+I
Sbjct:  111 QSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKA-DFIVYNACKCINEDYKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVL-RADKSVDYADASKTENTRVSYPIEHI 322          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_EDWI9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Edwardsiella ictaluri (strain 93-146) GN=pckA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.042e-41
Identity = 93/216 (43.06%), Postives = 127/216 (58.80%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRY-THYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            +P+ R+KVR ++  A+ + F+ NM IRP ++EL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS + EPDI+ AI    +LEN+        VD+ D S TENTR +YPI +I
Sbjct:  127 NPDSRLKVRFITEVAWQAHFVKNMFIRPEADELAGF-EPDFIVMNGAKCTNPQWQAQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSIMNYLLPLKGIASMHCSANVGEQGDVAIFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSADAEPDIYGAITRDALLENVTV-RADGSVDFDDGSKTENTRVSYPIYHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_WIGBR (Phosphoenolpyruvate carboxykinase [ATP] OS=Wigglesworthia glossinidia brevipalpis GN=pckA PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.777e-41
Identity = 90/214 (42.06%), Postives = 130/214 (60.75%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            ++R+KVR ++  A+ + F  NM I P  +EL  F   DFT+++  +    ++  H + S   I INL    ++I GT Y GE+KKGLFS+M+Y++P + I S+H   N G   DVA               D  RYLIGDDEH W  +GV N EGGCYAK I+LS EKEP+I+NAIK   +LEN++  + +  +++ D + TEN+R +YPI +I
Sbjct:  129 KNRLKVRFITDIAWQAHFFKNMFIEPIEQELNKF-LQDFTVFSVPKAINKKWKDHKLNSENFIAINLTENTLLIGGTWYGGEIKKGLFSVMNYILPLKNIASMHCSANEGFKKDVALFFGLSGTGKTTLSTDSKRYLIGDDEHGWCKDGVFNFEGGCYAKTINLSEEKEPEIFNAIKKNAILENVMVLKDS-NINFFDGTKTENSRVSYPINHI 340          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_YERPG (Phosphoenolpyruvate carboxykinase [ATP] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=pckA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.320e-41
Identity = 94/212 (44.34%), Postives = 126/212 (59.43%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHY-MTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            R++VR ++  A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  +  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+  DVA               D  R LIGDDEH W D+GV N EGGCYAK I LS E EPDI++AIK   +LEN+V       VD+ D S TENTR +YPI +I
Sbjct:  131 RLQVRFITEVAWQAHFVKNMFIRPSDEELARF-EPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKSDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVV-LADGTVDFNDGSKTENTRVSYPIYHI 340          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_AGRVS6.106e-4242.59Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_SODGM7.975e-4244.86Phosphoenolpyruvate carboxykinase [ATP] OS=Sodalis... [more]
PCKA_RHILO7.975e-4241.20Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_CAMLR7.975e-4244.81Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJJ7.975e-4245.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJE7.975e-4245.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ87.975e-4245.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_EDWI91.042e-4143.06Phosphoenolpyruvate carboxykinase [ATP] OS=Edwards... [more]
PCKA_WIGBR1.777e-4142.06Phosphoenolpyruvate carboxykinase [ATP] OS=Wiggles... [more]
PCKA_YERPG2.320e-4144.34Phosphoenolpyruvate carboxykinase [ATP] OS=Yersini... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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