FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACAH (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis (strain Al Hakam) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACAA (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis (strain A0248) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.077e-54
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    + +FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-EFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACHD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus halodurans GN=pckA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.082e-54
Identity = 105/215 (48.84%), Postives = 144/215 (66.98%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++V+  A+H+LF   + I+PT+EEL    TP+FTI +A  F  +       S   + I+   + ++I GT+YAGEMKK +FS+M+YL+P++ +LS+H   N+G +GDVA               D NR LIGDDEH WS+ GV NIEGGCYAKC++LS EKEP IWNAI+FG+VLEN++ DE T   DY D S+TENTRAAY +E I
Sbjct:  114 DKTYRLPLQVVNEFAWHNLFAQQLFIQPTTEELTQH-TPEFTIVSAPGFKADPSVDGTRSEAFVIISFEERIVLIGGTEYAGEMKKSIFSVMNYLLPEQDVLSMHCSANVGVEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSERGVFNIEGGCYAKCVNLSYEKEPQIWNAIRFGSVLENVIVDEKTGLPDYNDTSLTENTRAAYSLEAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain B4264) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.082e-54
Identity = 102/215 (47.44%), Postives = 146/215 (67.91%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF+H + IRPT EEL    +  FTI +A  F  +       S   I ++  ++ ++I GT+YAGEMKK +FS+M++L+P++ ILS+H   N+G++GDVA               D NR LIGDDEH WSDNGV NIEGGCYAKC++LS EKEP I++AI FG+VLEN++ ++ TR  DY D ++TENTRAAYP+  I
Sbjct:  114 DRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHES-GFTIVSAPNFKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAAYPMHAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_GEOKA (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus kaustophilus GN=pckA PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53
Identity = 104/215 (48.37%), Postives = 146/215 (67.91%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++R+ +++V+  A+H+LF+H + IRP++ EL     P FT+  A  F  +       S   I I+  R+ ++I GT+YAGEMKK +FS+M+YL+P++ IL +H   N+G++GDVA               D NR LIGDDEH WS+ G+ NIEGGCYAKCI+LSREKEP I++AI FG VLEN+V D+ TR  +Y D ++TENTRAAYP++ I
Sbjct:  114 DPKYRLPIQVVNEFAWHNLFVHQLFIRPSAAELAAH-EPQFTVICAPNFKADPKVDGTRSEAFIIISFERRTVLIGGTEYAGEMKKSIFSVMNYLLPEQGILPMHCSANVGQEGDVALFFGLSGTGKTTLSTDPNRRLIGDDEHGWSNRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAVLENVVLDDATRVPNYDDGTLTENTRAAYPLQAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_OCEIH (Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanobacillus iheyensis GN=pckA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D  +R+ +++++  A+H+LF   + I PT EEL +    +FT+ +A  F  +       S T I I+  ++ ++I GT+YAGE+KK +FS+M+YL+P++ +LS+H   N+G++GDVA               D  R LIGDDEH WS NGV NIEGGCYAKCI+LS EKEP I+NAI++GTVLEN++ ++++RE DY D S+TENTRAAYP+E I
Sbjct:  112 DHTYRLPIQVINEYAWHNLFSRQLFITPTEEELNNHQA-EFTVISAPGFKADPAIDGTNSETFILISFKKRIVLIGGTEYAGEIKKSIFSVMNYLLPQQDVLSMHCSANVGQEGDVALFFGLSGTGKTTLSADPYRKLIGDDEHGWSPNGVFNIEGGCYAKCINLSEEKEPQIYNAIRYGTVLENVILNDNSREPDYDDTSLTENTRAAYPLENI 325          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BACSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus subtilis GN=pckA PE=3 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D ++R+ + +V+  A+H+LF   + IRP   + +    P FTI +A  F  +  T    S T I ++  ++ ++I GT+YAGEMKK +FS+M++L+P+R ILS+H   N+G+ GDVA               D +R LIGDDEH WSD GV NIEGGCYAKCI LS EKEP I+NAI+FG+VLEN+V DE TRE +Y D   TENTRAAYPI  I
Sbjct:  114 DEKYRLPITVVNEFAWHNLFARQLFIRPEGNDKKTVEQP-FTILSAPHFKADPKTDGTHSETFIIVSFEKRTILIGGTEYAGEMKKSIFSIMNFLLPERDILSMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKLIGDDEHGWSDTGVFNIEGGCYAKCIHLSEEKEPQIFNAIRFGSVLENVVVDEDTREANYDDSFYTENTRAAYPIHMI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_GEOTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 103/215 (47.91%), Postives = 144/215 (66.98%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP+ R+ +++V+  A+H+LF+H + IRP++EEL D   P FT+  A  F  +       S   I I+  ++ ++I GT+YAGEMKK +FS+M+YL+P++ IL +H   N+G++GDVA               D  R LIGDDEH WS  G+ NIEGGCYAKCI+LSREKEP I++AI FG VLEN++  + TR  DY D ++TENTRAAYP++ I
Sbjct:  114 DPKARLPIQVVNEFAWHNLFVHQLFIRPSAEELADH-EPQFTVICAPNFKADPAVDGTRSEAFIIISFEQRTVLIGGTEYAGEMKKSIFSVMNYLLPEQGILPMHCSANVGQEGDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWSSRGIFNIEGGCYAKCINLSREKEPQIFDAIGFGAVLENVILHDATRVPDYDDGTLTENTRAAYPLQAI 327          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ALKOO (Phosphoenolpyruvate carboxykinase [ATP] OS=Alkaliphilus oremlandii (strain OhILAs) GN=pckA PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.713e-52
Identity = 100/215 (46.51%), Postives = 141/215 (65.58%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D ++R+ +R+++  AY +LF   M I+P + E E+F  P+FT+        +       S   I +N A+K ++I GT+Y+GE+KK +F++M+YL+P + +L +H   N+G+DG+VA               D+NR LIGDDEH W+ NGV N EGGCYAKCI+L+ E+EP IWNAIK G +LENIV DE+T  +DY D   TENTRAAYP+EYI
Sbjct:  112 DLDYRMPIRVINEFAYQNLFASQMFIKPKAGERENFD-PEFTVLALPDLKADPAVDGTNSEVFIILNFAQKIVLIGGTRYSGEIKKSIFTVMNYLLPFKDVLPMHCSANIGEDGNVALFFGLSGTGKTTLSADNNRKLIGDDEHGWTANGVFNFEGGCYAKCINLTEEQEPQIWNAIKHGAILENIVIDENTGHIDYDDDRYTENTRAAYPVEYI 325          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACAN4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAH4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAA4.077e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACHD9.082e-5448.84Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC49.082e-5447.44Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_GEOKA3.451e-5348.37Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_OCEIH4.507e-5347.44Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanob... [more]
PCKA_BACSU4.507e-5349.30Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_GEOTN1.004e-5247.91Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_ALKOO1.713e-5246.51Phosphoenolpyruvate carboxykinase [ATP] OS=Alkalip... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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