FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAS (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MSSA476) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAR (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain MRSA252) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain N315) GN=pckA PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAM (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pckA PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAE (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Newman) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAC (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain COL) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAA9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH9) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAA8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain NCTC 8325) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAA3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
[Close]
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH1) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2 
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STAAS3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAR3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAN3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAM3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAE3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAC3.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA93.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA83.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA33.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA23.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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