FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAA1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49
Identity = 102/215 (47.44%), Postives = 138/215 (64.19%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +A  F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEFN (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella frigidimarina (strain NCIMB 400) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 100/216 (46.30%), Postives = 135/216 (62.50%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPD-FTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D EH I VR+ +  A+H LF  N+ I P   E  + G  D + I NA  F C        S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G DGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DE  R  DY D S+TEN+RAAYP+E+I
Sbjct:  102 DDEHYIPVRVTTEFAWHQLFARNLFIAP---ETFNRGNKDTWQIINAPGFVCEPQRDGTNSEAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGHDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVLDEQ-RVPDYKDTSLTENSRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_NOVAD (Phosphoenolpyruvate carboxykinase [ATP] OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 97/215 (45.12%), Postives = 135/215 (62.79%), Query Frame = 2
Query:    5 PEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            PEHR+KVR+++  A+H+LF+  + +RPT++EL  F  P++TI +   F  +   H   S T I +N   K ++I GT YAGEMKK +F +++YL+P + ++ +H   N+G DG  A               D +R LIGDDEH WSD  V N EGGCYAK I LS E EP+I+   K FGTVLEN+V D  TR +D  D S+ EN+R +YPI++I
Sbjct:  117 PEHRVKVRVINELAWHNLFIRTLLVRPTTDELASF-VPEYTIIDLPSFRADPARHGSRSETVIAVNFTEKLILIGGTAYAGEMKKSVFGILNYLLPVKGVMPMHCSANVGPDGKTAVFFGLSGTGKTTLSADASRTLIGDDEHGWSDTAVFNFEGGCYAKMIRLSAEAEPEIFATTKRFGTVLENVVIDPVTRTIDLDDNSLAENSRGSYPIDFI 330          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_LEPBP (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49
Identity = 99/212 (46.70%), Postives = 136/212 (64.15%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            RI +R+V+ RA+   F  NM +RPT EEL     P+FTI NA  +   +Y  H + S   +  +LA+K  +I GT+Y GEMKKG+FS+M+Y +P + +L++H   N+GKDGD A               D NR LIGDDEH W DNG+ NIEGGCYAK I+L  + EP+I+ AI+   +LEN+V+D  T++VDY   + TENTR +YPI +I
Sbjct:  118 RISLRVVTERAWQHHFCTNMFLRPTKEELAKLD-PEFTIINASGYKNPKYKEHGLNSEVFVIFHLAKKICIIGGTEYGGEMKKGIFSVMNYYLPLKNVLTMHCSANVGKDGDSALFFGLSGTGKTTLSTDPNRKLIGDDEHGWDDNGIFNIEGGCYAKTINLDPKTEPEIYAAIRRDALLENVVYDATTKKVDYSSAAKTENTRVSYPIFHI 328          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_LEPBA (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=pckA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.157e-49
Identity = 99/212 (46.70%), Postives = 136/212 (64.15%), Query Frame = 2
Query:   14 RIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYT-HYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            RI +R+V+ RA+   F  NM +RPT EEL     P+FTI NA  +   +Y  H + S   +  +LA+K  +I GT+Y GEMKKG+FS+M+Y +P + +L++H   N+GKDGD A               D NR LIGDDEH W DNG+ NIEGGCYAK I+L  + EP+I+ AI+   +LEN+V+D  T++VDY   + TENTR +YPI +I
Sbjct:  118 RISLRVVTERAWQHHFCTNMFLRPTKEELAKLD-PEFTIINASGYKNPKYKEHGLNSEVFVIFHLAKKICIIGGTEYGGEMKKGIFSVMNYYLPLKNVLTMHCSANVGKDGDSALFFGLSGTGKTTLSTDPNRKLIGDDEHGWDDNGIFNIEGGCYAKTINLDPKTEPEIYAAIRRDALLENVVYDATTKKVDYSSAAKTENTRVSYPIFHI 328          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHESH (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sediminis (strain HAW-EB3) GN=pckA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.735e-49
Identity = 98/215 (45.58%), Postives = 133/215 (61.86%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH   VR+ +  A+H LF  N+ I P  E+      P + I NA  F C        S  ++ IN A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G  GD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IWNAI+FGTVLEN+  DE+ R  DY D ++TEN+RAAYP+E+I
Sbjct:  102 DPEHYQPVRVTTETAWHQLFARNLFIVP--EQFNAADKPIWQIMNAPGFECIPERDGTHSDATVIINFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGIKGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWNAIRFGTVLENVTMDEN-RVPDYTDSTLTENSRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_STAAB (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.797e-49
Identity = 101/215 (46.98%), Postives = 137/215 (63.72%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D +  +K+ +++  A+H+LF  NM IRP S+E      P+FTI +   F  +       S T + I+   K ++I GT+YAGEMKKG+FS+M+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W+ NGV NIEGGCYAK I+LS+EKEP I++AIK+G +LEN V  E    VD+ D   TENTRAAYPI +I
Sbjct:  116 DKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVSVPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHI 329          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_BRAJA (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium japonicum GN=pckA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.797e-49
Identity = 101/216 (46.76%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNA-IKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +RIK R+ +  A+HSLF+  + IRP + EL  F TP+ TI +   F  +   H   S   + I+ ARK ++I G+ YAGEMKK +F+ ++Y +P+R ++ +H   N+G   D A               D NR LIGDDEH W  NGV N EGGCYAKCI LS+E EP I+ A  +FG VLEN V DE TR VD+ D S TENTR+AYP+++I
Sbjct:  117 DPAYRIKTRVFTELAWHSLFIRTLLIRPEAIELSTF-TPELTIIDMPSFRADPKRHGCKSENVVAIDFARKIVLIGGSYYAGEMKKSVFTTLNYYLPERGVMPMHCSANVGAKDDAAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGPNGVFNFEGGCYAKCIKLSQEAEPQIYAASTRFGAVLENCVLDEDTRVVDFDDGSKTENTRSAYPLDFI 331          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_SHEPW (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=pckA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.149e-48
Identity = 97/213 (45.54%), Postives = 133/213 (62.44%), Query Frame = 2
Query:    8 EHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            EH   V + +  A+H LF  N+ I PT     D   P + I NA  F CN       S  ++ +N A +++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G DGD                 D  R+LIGDDEH W+  GV NIEGGCYAKCIDLS++ EP IW+AI+FGTVLEN+V DE+ R  DY + ++TENTRAAYP+E+I
Sbjct:  104 EHYQPVTVTTEYAWHQLFARNLFIVPTEFNAAD--KPTWQIINAPGFVCNPERDGTHSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGSDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVTDEN-RVPDYTNSTLTENTRAAYPLEHI 313          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_PSEHT (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pckA PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48
Identity = 93/215 (43.26%), Postives = 136/215 (63.26%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPEH + V + +  A+H +F  NM I+P S    D   P + + N   F C        S  ++ IN A++++++ G +YAGEMKK +FS+ ++L+P + +L +H   N+G+ GD A               D  R+LIGDDEH W+   V NIEGGCYAKCIDLS++ EP IW+AI+FGT+LEN+V DE+ R  D+ D S+T+N+RAAYP+E++
Sbjct:  101 DPEHYLPVVVTTETAWHHIFAKNMFIQPKSYNSSD--VPQWQVMNVPSFVCEPERDGTNSDGTVLINFAQRKVLLAGMRYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGEAGDTALFFGLSGTGKTTLSADPTRFLIGDDEHGWAPGSVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTILENVVLDEN-RVPDFNDTSLTQNSRAAYPLEHV 312          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STAA13.023e-4947.44Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_SHEFN3.949e-4946.30Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_NOVAD3.949e-4945.12Phosphoenolpyruvate carboxykinase [ATP] OS=Novosph... [more]
PCKA_LEPBP5.157e-4946.70Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_LEPBA5.157e-4946.70Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_SHESH6.735e-4945.58Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_STAAB8.797e-4946.98Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BRAJA8.797e-4946.76Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_SHEPW1.149e-4845.54Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_PSEHT1.501e-4843.26Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudoa... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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