FC931559

Overview
NameFC931559
Unique NameFC931559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931559_ssr95 microsatellite FC931559_ssr95:95..106. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig584 contig Ccv1_Contig584:11..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_ANASP (Ribose-phosphate pyrophosphokinase OS=Anabaena sp. (strain PCC 7120) GN=prs PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.629e-21
Identity = 41/64 (64.06%), Postives = 55/64 (85.94%), Query Frame = 2 
Query:  449 TTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            T N+R++LFSG++N  LSQE+A Y+G++LG +  KRFADGE+YVQ+QES+RGCDVYL+QP C P
Sbjct:   17 TENHRLRLFSGSSNVQLSQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPCCQP 80

HSP 2 Score: 28.4906 bits (62), Expect = 2.629e-21
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDAC 683
            C  PV  +++LMELLIM+DAC
Sbjct:   77 CCQPV--NDHLMELLIMVDAC 95
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_SYNE7 (Ribose-phosphate pyrophosphokinase OS=Synechococcus elongatus (strain PCC 7942) GN=prs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.449e-21
Identity = 41/62 (66.13%), Postives = 56/62 (90.32%), Query Frame = 2 
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N+R++LFSG++N ALSQE++ Y+G++LG +  KRFADGE+YVQ+QES+RGCDVYL+QPTC P
Sbjct:   19 NHRLRLFSGSSNSALSQEVSRYLGIDLGPMIRKRFADGELYVQIQESIRGCDVYLMQPTCWP 80

HSP 2 Score: 26.9498 bits (58), Expect = 4.449e-21
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  642 HENLMELLIMIDAC 683
            +++LMELLIMIDAC
Sbjct:   82 NDHLMELLIMIDAC 95
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_PROMP (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=prs PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.657e-20
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 2 
Query:  401 LPKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +  F+     E+     TN+R++L SGT+NP L++EIA Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P
Sbjct:    1 MTSFITAVDNEEPTFNLTNSRLRLVSGTSNPKLAEEIASYLGIENVPLVSKRFADGELYVQIQQSIRGCDVFLIQPTCAP 80

HSP 2 Score: 26.1794 bits (56), Expect = 1.657e-20
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDAC 683
            C+P    +++LMEL+IM+DAC
Sbjct:   78 CAPV---NDSLMELMIMVDAC 95
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_GLOVI (Ribose-phosphate pyrophosphokinase OS=Gloeobacter violaceus GN=prs PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.985e-19
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 2 
Query:  404 PKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            P  L      + V    + R++LFSG+ANP L+Q +A Y+G+  G +  K FADGE+YVQ+QES+RGCDVYLVQPTC P
Sbjct:    4 PDLLPRRSTVQPVRLMGDERLRLFSGSANPELAQLVARYLGLAPGPLVRKSFADGELYVQIQESIRGCDVYLVQPTCSP 82

HSP 2 Score: 27.335 bits (59), Expect = 2.985e-19
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDAC 683
            CSP    +++LMELLI+IDAC
Sbjct:   80 CSPV---NDSLMELLILIDAC 97
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_PROMA (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus GN=prs PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.567e-19
Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 2 
Query:  419 TARMEKTVNRTTN-NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            TA   + +  + N +R+KL SGT+NP L++EI+ Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P
Sbjct:    2 TAATAQNIKSSLNTDRLKLISGTSNPILAKEISSYIGIEDVPVVSKRFADGELYVQIQQSIRGCDVFLIQPTCAP 76

HSP 2 Score: 26.1794 bits (56), Expect = 6.567e-19
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDAC 683
            C+P    +++LMEL+IM+DAC
Sbjct:   74 CAPV---NDSLMELMIMVDAC 91
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_STAAW (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=prs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.628e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 26.1794 bits (56), Expect = 1.628e-16
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDAC 683
            S PV  H  LMELLIMIDAC
Sbjct:   67 SYPVNLH--LMELLIMIDAC 84
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_STAAS (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=prs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.628e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 26.1794 bits (56), Expect = 1.628e-16
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDAC 683
            S PV  H  LMELLIMIDAC
Sbjct:   67 SYPVNLH--LMELLIMIDAC 84
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_STAAR (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=prs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.628e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 26.1794 bits (56), Expect = 1.628e-16
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDAC 683
            S PV  H  LMELLIMIDAC
Sbjct:   67 SYPVNLH--LMELLIMIDAC 84
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_STAAN (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=prs PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.628e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 26.1794 bits (56), Expect = 1.628e-16
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDAC 683
            S PV  H  LMELLIMIDAC
Sbjct:   67 SYPVNLH--LMELLIMIDAC 84
[Close]
BLAST of FC931559 vs. ExPASy Swiss-Prot
Match: KPRS_STAAM (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=prs PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.628e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 26.1794 bits (56), Expect = 1.628e-16
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDAC 683
            S PV  H  LMELLIMIDAC
Sbjct:   67 SYPVNLH--LMELLIMIDAC 84
The following BLAST results are available for this feature:
BLAST of FC931559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
KPRS_ANASP2.629e-2164.06Ribose-phosphate pyrophosphokinase OS=Anabaena sp.... [more]
KPRS_SYNE74.449e-2166.13Ribose-phosphate pyrophosphokinase OS=Synechococcu... [more]
KPRS_PROMP1.657e-2051.25Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_GLOVI2.985e-1953.16Ribose-phosphate pyrophosphokinase OS=Gloeobacter ... [more]
KPRS_PROMA6.567e-1953.33Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_STAAW1.628e-1651.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAS1.628e-1651.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAR1.628e-1651.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAN1.628e-1651.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAM1.628e-1651.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]

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Properties
Property NameValue
Genbank descriptionC34106E01EF PostHarvP1 Citrus clementina cDNA clone C34106E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931559 ID=FC931559; Name=FC931559; organism=Citrus clementina; type=EST; length=683bp
GGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAA
CCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGA
AAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGA
AACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCAC
AATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTC
GGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCG
GGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCAT
TGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACG
CTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAAC
TACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTT
CCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATA
AAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAG
AGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAAT
CTCATGGAGCTTTTGATAATGATAGATGCGTGT
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