FC931561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31 Identity = 76/234 (32.48%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 4 NLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 ++V++A+ V G + I I K G S DS + G L+ GMP RV AKIA LD L+ K ++ ++ +T P +++ E+ K+ ++KL GANV++ KGIDD+A + + G +AVRRV++ D+ + KA GA ++S+ D ++ LG + I+G K AV+++LRGSND LDE ER+++DA+ ++ L Sbjct: 180 DMVIDAIVNVAEPLPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDD------LGYAELVEERRVGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNIL 407
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.664e-30 Identity = 76/231 (32.90%), Postives = 127/231 (54.98%), Query Frame = 1 Query: 19 AVQAVK-MTNQRGEVKY-PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 AV+AVK + +RG+ Y + I I+K +G + DS + G L+ GMP RV AKI LD L+ K ++ ++ + DP +LEK Q+E ++ + ++K+ GANV++ KGID++A + + G +AVRRV++ D+ + +ATG +VS D+ E+ LG + I+G K +VS+++RG + ++DE ER++ DA+ V L Sbjct: 162 AVKAVKQVVEKRGDKNYVDLDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEIDAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPED------LGYAALVEERKVGEDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADAL 386
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30 Identity = 77/228 (33.77%), Postives = 124/228 (54.39%), Query Frame = 1 Query: 19 AVQAVKMTNQRGEVKYPIKGINIL--KAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVK 696 AV+AVK ++ + KY + NI K G+ +S + G ++ MP RV AKIA ++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG I ++G K AV++++RG ++++DE+ERAL DA+ VK Sbjct: 178 AVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVK 399
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30 Identity = 77/228 (33.77%), Postives = 124/228 (54.39%), Query Frame = 1 Query: 19 AVQAVKMTNQRGEVKYPIKGINIL--KAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVK 696 AV+AVK ++ + KY + NI K G+ +S + G ++ MP RV AKIA ++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG I ++G K AV++++RG ++++DE+ERAL DA+ VK Sbjct: 178 AVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVK 399
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30 Identity = 77/228 (33.77%), Postives = 123/228 (53.95%), Query Frame = 1 Query: 19 AVQAVKMTNQRGEVKYPIKGINIL--KAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVK 696 AV AVK ++ + KY + NI K G+ +S + G ++ MP RV AKIA ++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG I ++G K AV++++RG ++++DE+ERAL DA+ VK Sbjct: 178 AVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEIVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVK 399
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30 Identity = 79/235 (33.62%), Postives = 129/235 (54.89%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 A +VVEAV+AV + + G+V + I + K G ++ + G ++ R MP +V AKIA L+ ++ + + ++ +TDP +L + ++E M K+ +EK+ GANV+ KGIDD+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG I ++ K AV+++ RGS +++++E+ RA+ DAI VK L Sbjct: 174 AEIVVEAVRAV-VDEETGKVDKDL--IKVEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPED------LGEAGLVEERKVAGDAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCAL 399
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30 Identity = 76/235 (32.34%), Postives = 125/235 (53.19%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 ++LVV AVQ+V N + + K G + +S + G ++ R ++ MP V A IA +D L+ + ++ +V VTDP +L+ +E + KE ++ L AGANV+ GIDDMA Y + G +AVRR + +D +++ATGAT VS D+E + LG+ I ++ + +V+LILRG ++++DE+ERA+ D++ V+ TL Sbjct: 176 SDLVVRAVQSVADDND-----VDTDNVKVEKVTGGAIENSELIEGVIVDKERVSENMPYAVEDANIALVDDGLEVQETEIDTEVNVTDPDQLQNFLDQEEEQLKEMVDALKDAGANVVFADSGIDDMAQHYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIEAAD------LGAAGSVAQKDIGGDERIFVEDVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTL 399
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29 Identity = 74/233 (31.76%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 ++VEAV AV ++ G+V + I I K G S ++ +NG ++ R + MP ++ AKIA L+ ++ + + ++ +TDP +L + ++E M K+ ++ + +GANV+ KGIDD+A Y + G +AVRRV+K DM ++KATGA +V+ D++ E+ LG I ++ K AV++++RG+ +++++E+ RA+ DAI V T+ Sbjct: 175 MIVEAVTAV--VDESGKVDKDL--IKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAED------LGEAGIVEERKIAGDAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTI 397
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 74/235 (31.49%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 + LVV+AV AVK + ++I K G + +S + G ++ R + MP V A IA LD L+ + ++ +V VTDP +L++ +E KE +++L++ GA+ + GIDDMA Y + G +AVRR + D++ +A+ATG +VS+ D+E ++ LG I ++ + +V+LILRG ++++DE+ERA+ D++ V+ TL Sbjct: 177 SELVVDAVLAVK-----DDDGIDTNNVSIEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDMAQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADD------LGFAGSVGQKDVGGDERIFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTL 400
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 65/236 (27.54%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGT-KTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 A+L+V AV+ V + G ++ ++I G+SA +S L G ++ MP++ A + L+ ++ + + V + P +L+K +E K+++++++ +GA+V+ KGIDD+A Y + G +AVRR +K D+R + TGA +VS ++ ++++LG ++G V+L+LRGS D+++DE+ER + DA+ V T+ Sbjct: 177 ADLIVRAVRQVTVEANDGSHVVDLENVSIETQTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNEPVEVEETDIDTNVSIESPDQLQKFLDQEEAQLKQKVDQIVDSGADVVFCQKGIDDLAQHYLAKQGILAVRRTKKSDIRFLKNITGAAVVSDL------DSIEAAVLG---RASVRRDEAGELFYVEGIGDDVHGVTLLLRGSTDHVVDELERGVQDALDVVASTV 403 The following BLAST results are available for this feature:
BLAST of FC931561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931561 ID=FC931561; Name=FC931561; organism=Citrus clementina; type=EST; length=706bpback to top |