FC931561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 61/239 (25.52%), Postives = 113/239 (47.28%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRA-AQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTT-SAVSLILRGSNDYMLDEMERALHDAICTVK 696 A++ V+AV +V N V +K I ++K G + D+ + G + + G P R+ AKI + F L K + ++V+D +++K+ + E + E K+ K+G NV+L K I +D++L Y + + ++ + ++D+ I G V+ ++F + LG + + G V+++ RGSN +LDE ER+LHDA+C ++ Sbjct: 177 ASIAVDAVLSV--INPATAVNVNLKDIKLIKKLGGTIEDTELVQGLVFDQTASHTAGGPTRIQNAKIGLIQFCLSAPKTYMDNNIVVSDYSKMDKVIKEEPKLILEMCRKIQKSGCNVLLVQKSILRDAVNDLSLHYLAKLKILVIKDIERDDIEFICNTIGCQPVANI------DSFTADKLGKADLVEEVGTSDGKIVKVTGIPNPGKTVTVLCRGSNKLVLDEAERSLHDALCVIR 407
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 63/235 (26.81%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 19 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALN-AFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSA---VSLILRGSNDYMLDEMERALHDAICTVK 696 AV AV ++ + I ++K G + D+ ++G L G P AKI + F + K ++V+D R+++KI + E +K+ KA NV+L K I +D+AL + + G + ++ + +E++ ++K+ G +S E F LGS + G K +A VS+I+RG+N +LDE ER+LHDA+C ++ Sbjct: 175 AVDAVLSITEKDSKTVDLNDIRLVKKVGGTIGDTEMVDGVVLTQTVVKTAGGPTMKEKAKIGLIQFQISPPKPDTENNIVVSDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLAKLGIMVIKDIEREEIEFLSKSLGCKPISDV------ELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIR 403
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 71/238 (29.83%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAP------AKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVK 696 A + VEAV V M R +V + + I + G S DS +NG L+ + MP V P K+A L + K + ++ ++ E +K++ E D KE I+ + KAGA+V++ G DD A ++ AVR V +++ HIA +T +V F D+ ++ S + ++I+ +K T V+ +RGSN ++DE ERALHD++C V+ Sbjct: 201 AEMAVEAVINV-MDKDRKDVDFDL--IKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRI----YEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVR 431
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 60/238 (25.21%), Postives = 114/238 (47.90%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALN---AFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 + ++V+AV+ K+ + + I + K G S DS +NG A + + P R+ +I CL+ L+ + ++ V E +++ E + + ++++++ +GANV+L++ I D A +YF + G RV KED+ + + G +++ +EG LG+ +G TSA ++ILRG +L+E+ R++HDA+C V+ L Sbjct: 166 SRMIVDAVKQAKIDDA--------ESIGVKKVQGGSIGDSVAVNGIAFEKCFTYAGYEQQPKRILNPRILCLNVELEWKSERDNAEIRVGGVEEYQRVVDAEWAIIRRKLDEIISSGANVVLSSLSIGDYATQYFAKHGIFCAGRVSKEDLGRVVGSCGGSILGATDYLEGS-------LGACALFEERQLGKFRYNYFEG-GGTSACTMILRGPGQEVLEEIGRSVHDAVCVVRTAL 387
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 61/236 (25.85%), Postives = 112/236 (47.46%), Query Frame = 1 Query: 19 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALN--AFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSA---VSLILRGSNDYMLDEMERALHDAICTVK 696 AV +V + + I ++K G + D+ ++G L A ++A G P R AKI + F + K ++V D R+++KI + E +K+ KA NV+L K I +D+AL + + + V+ + +E++ ++K G ++ E F LGS + + G + +A VS+++RG+N+ ++DE ER+LHDA+C ++ Sbjct: 174 AVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGG-PTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADI------ELFTEDRLGSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIR 402
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 57/236 (24.15%), Postives = 111/236 (47.03%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNA---FRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKR 699 + +VV+AVQ + + + I I K G DS F+ G A + + P + K+ CL+ L+ + ++ ++DP + + + E + +++E + +G NV+L+ I D+A ++F + RV +D+R + +ATGA + +T +++ + ++G+ + G T ++ILRG + +DE ER+LHD+I V+R Sbjct: 176 SKMVVDAVQLL-------DDNIDLDMIGIKKESGGGLGDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKVLCLNIELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEAIHASGVNVVLSKLAIGDLATQFFADKNMFCAGRVPDDDIRRVCRATGAAIQNTTSNIIPD------VIGTCDLFEEVQVGGQRYNLFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRR 398
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 53/209 (25.36%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 79 INILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 INI G+ + + G +N + M V +IA L + K++ +++++P+E +++ + E E IE + ++G+N+++ G DD A +E G AVR V ++ +A TG ++V+ F D+E +S L + I+++ + AV++++RG+ND +++E +R++ DA+C V+ L Sbjct: 203 INIESKVGRDLSSTALIKGIVINKEFSHPQMKKEVKDGRIALLSCPFEPPKLKTKHSLVISNPKEYKELEEYEKKKFAEMIESIKRSGSNIVMCQWGFDDEANSLLMENGLPAVRWVGGHELELLAVHTGGSIVARFEDLE-----ESDLGKARVREESLGTENDKIIVVENEGCSKAVTILVRGANDLVIEEAKRSIRDALCAVRNIL 406
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 66/234 (28.21%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L VEAV +K + ++ I+I+K G S DSY G+ L+ + P R+ AKI + + K+++ G +V V ++ +I E + KE++E++LK G N + + I + + F AG +A+ + +A TG + STF E + LGS I G A +++LRG+ +LDE ER+LHDA+C + +T+ Sbjct: 182 LAVEAVLRLKGSGN-------LEAIHIIKKLGGSLADSYLDEGFLLDK-KIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTV 401
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 66/234 (28.21%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L VEAV +K + ++ I+I+K G S DSY G+ L+ + P R+ AKI + + K+++ G +V V ++ +I E + KE++E++LK G N + + I + + F AG +A+ + +A TG + STF E + LGS I G A +++LRG+ +LDE ER+LHDA+C + +T+ Sbjct: 182 LAVEAVLRLKGSGN-------LEAIHIIKKLGGSLADSYLDEGFLLDK-KIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTV 401
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 65/234 (27.78%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L VEAV +K + ++ I+++K G S DSY G+ L+ + P R+ AKI + + K+++ G +V V ++ +I E + KE++E++LK G N + + I + + F AG +A+ + +A TG + STF E + LGS I G A +++LRG+ +LDE ER+LHDA+C + +T+ Sbjct: 182 LAVEAVLRLKGSGN-------LEAIHVIKKLGGSLADSYLDEGFLLDK-KIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTV 401 The following BLAST results are available for this feature:
BLAST of FC931561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931561 ID=FC931561; Name=FC931561; organism=Citrus clementina; type=EST; length=706bpback to top |