FC931561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 65/234 (27.78%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L VEAV +K + ++ I+++K G S DSY G+ L+ + P R+ AKI + + K+++ G +V V ++ +I E + KE++E++LK G N + + I + + F AG +A+ + +A TG + STF E + LGS I G A +++LRG+ +LDE ER+LHDA+C + +T+ Sbjct: 182 LAVEAVLRLKGSGN-------LEAIHVIKKLGGSLADSYLDEGFLLDK-KIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTV 401
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 65/234 (27.78%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 7 LVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L VEAV +K + ++ I+++K G S DSY G+ L+ + P R+ AKI + + K+++ G +V V ++ +I E + KE++E++LK G N + + I + + F AG +A+ + +A TG + STF E + LGS I G A +++LRG+ +LDE ER+LHDA+C + +T+ Sbjct: 182 LAVEAVLRLKGSGN-------LEAIHVIKKLGGSLADSYLDEGFLLDK-KIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVK------LGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTV 401
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 60/238 (25.21%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALN---AFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 + LVV+AV+ ++ TN + IK + G S DS+ ++G A ++ + P + KI L+ L+ + ++ + +P + + I E ++ E++ K++++GAN++L+ I D+A +YF + RV EDM+ + K+TGA + +T + +LG+ + K + + ++ILRG + + E ER+L+DAI V+R + Sbjct: 117 SELVVQAVETLE-TNLLDKDLIGIKMVT-----GGSVTDSFLVSGVAFKKTFSYAGFEQQPKKFNNPKICLLNIELELKAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGDLATQYFADRNIFCAGRVDAEDMKRVQKSTGAIVQTTVNGL------TEDVLGTCNQFEEVQIGAERYNLFKDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCM 342
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 65/235 (27.66%), Postives = 116/235 (49.36%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 AN+ V+AV +V QR +V + + I + G S D+ + G ++ + MP R+ AKIA L + K + ++ +T E E ++ E + +E I+ + AGAN+++ G DD A ++ AVR V ++ IA AT +V F D+ ++ + ++ ++I+ + AV++ +RGSN ++DE +RALHDA+C V+ + Sbjct: 188 ANIAVDAVLSVADL-QRKDVDFEL--IKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIV----REVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLI 415
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 61/236 (25.85%), Postives = 113/236 (47.88%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 AN+VV+AV + + I+I+K G S R+SY G+ L + G P R+ KI + + K+++ G +V+V EL K+ E + + +K++ G N + + + ++ +YF E G +++ + + +A TGA +VSTF E + +G+ I G + A +++LRG+ ++L+E ER++HDA+C + T+ Sbjct: 179 ANMVVDAVLRLNGNTN-------LDNIHIIKKSGGSLRESYLDEGFILEK-KIGVGCPKRLENPKILIANTAMDTDKIKIFGGKVVVDSMTELAKMEDAEKEKMLNKCKKIVDHGINCFVNRQLVYNLPEQYFAEHGVMSIEHADFDGIERLALVTGAEIVSTFDHPELVK------IGTCKLIEEVMIGEDKVIRFSGIPSGEACTIVLRGATSHILEEAERSIHDALCVLAVTV 400
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 58/238 (24.37%), Postives = 111/238 (46.64%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTT-SAVSLILRGSNDYMLDEMERALHDAICTVK 696 A + VEAV +K+T E +K + I+++ G + D+ ++G P RV AKI + F + K + V+V+D ++++ + E ++++ KAG NV+L K I D+A+ + + + V+ + ED+ + K +++ E ++ L+ + + G + VS+++RGSN +L+E ER+LHDA+C V+ Sbjct: 177 APIAVEAV--LKVTEAGHESGVDLKNVKIIRSLGGTIDDTELVDGLVFTQRSCGVNGPKRVEKAKIGLIQFCISAPKTDMDHSVIVSDYAAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAMHFLDKIKVMVVKDIEHEDIEFVCKTLNCRPIASLDHFLPEHLVNADLV------EEVSSGSSKFVKVTGIQNMGQTVSIVVRGSNKLVLEEAERSLHDALCVVR 406
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 57/214 (26.64%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 73 KGINILKAHGKSARDSYFLNGYALN---AFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 K I I K G + +S F+NG A ++ + P + KI L+ L+ + +V V + + I E + E++ ++ + GAN++L+ I D+A ++F + RV +DM + +A G ++ ST +D++ E LG+ + +G +L+LRG + ++ E+ER+LHDAI VKR L Sbjct: 197 KLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEH------LGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRAL 404
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 65/235 (27.66%), Postives = 107/235 (45.53%), Query Frame = 1 Query: 4 NLVVEAVQAVKMT-NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 N+ ++AV+ V+ N R E+ K + K G DS L G +N M + +I LD +L+ K + + +T + +I Q E + ++ E +++ +V++T KGI D+A Y + A A+RRVRK D IA+A GA +VS EE + + I K A +++LRG++ +L E+ER L DA+ + L Sbjct: 174 NIALDAVKTVQFEENGRKEIDIK-KYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVS-----RPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVL 402
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 65/235 (27.66%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 4 NLVVEAVQAVKMT-NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 N+ ++AV+ V+ N R E+ K + K G DS L G +N M + +I LD +L+ K + + +T + +I Q E + ++ E +++ +V++T KGI D+A Y + A A+RRVRK D IA+A GA +VS ++ E+ + L I K A +++LRG++ +L E+ER L DA+ + L Sbjct: 174 NIALDAVKTVQFEENGRKEIDIK-KYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGL-----LEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVL 402
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 65/235 (27.66%), Postives = 107/235 (45.53%), Query Frame = 1 Query: 4 NLVVEAVQAVKMT-NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 N+ ++AV+ V+ N R E+ K + K G DS L G +N M + +I LD +L+ K + + +T + +I Q E + ++ E +++ +V++T KGI D+A Y + A A+RRVRK D IA+A GA +VS EE + + I K A +++LRG++ +L E+ER L DA+ + L Sbjct: 174 NIALDAVKMVQFEENGRKEIDIK-KYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVS-----RPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVL 402 The following BLAST results are available for this feature:
BLAST of FC931561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931561 ID=FC931561; Name=FC931561; organism=Citrus clementina; type=EST; length=706bpback to top |