FC931561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 58/232 (25.00%), Postives = 106/232 (45.69%), Query Frame = 1 Query: 4 NLVVEAVQAVKMTNQRGEVKYPIKGI-NILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVK 696 +L + AV+ V T+ G ++ IK + K G S L+G LN M R+ +I LD L+ K + + ++ + +I + E + K + ++ ++++T KG+ D+A Y ++A A+RR RK D IA+A GA +V+ D+ ++ L + G K A +++LRG + +++E+ER L DA+ + Sbjct: 172 HLALRAVRTVASTSN-GRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGL-----FYIDKLGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVAR 397
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 57/228 (25.00%), Postives = 106/228 (46.49%), Query Frame = 1 Query: 4 NLVVEAVQAVKMTNQRGEVKYPIKGI-NILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAI 684 NL ++AV V + + G + IK + K G D + G LN M + +I LD +L+ K + V +T+ + + + E + + E ++K +++ T KG+ D+A +FV+ G +RR++K + IA+ +GAT+VS +E +S + ++ K A +++LRG++ +L+E+ER L DA+ Sbjct: 172 NLALDAVMTVHIQEEDGRSEIDIKRYAKVEKIPGGDISDCRVIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGESDTMVDITNEDDFSALLKIEEEYVQRICEDIIKLKPDLVFTEKGVSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVS-----RTDELQESDIGTGCGLFEIRKIGDEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDAL 394
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 55/213 (25.82%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 79 INILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIM-IKGTKTT-SAVSLILRGSNDYMLDEMERALHDAICTVK 696 I I+K G + D + G L R A RV AKI + F L K + Q++V+D +++++ + E ++++ KAG NV+ K I D+AL + + + V+ + +ED+ I K G ++ + F +LG+ ++ I G + VS+++RGSN +++E ER++HDA+C ++ Sbjct: 205 IKIIKKLGGTIDDCELVEGLVLTQ-RVANSSVSRVEKAKIGLIQFCLSPPKTDMDNQIVVSDYTQMDRVLREERAYILNMVKQIKKAGCNVLFIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPIAHI------DHFTPEMLGTAELAEEVSLDGSGKLVKITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIR 410
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 54/216 (25.00%), Postives = 105/216 (48.61%), Query Frame = 1 Query: 70 IKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIM-IKGTKTTS-AVSLILRGSNDYMLDEMERALHDAICTVK 696 ++ I I+K G + D + G L + G+ RV AKI + F L K + Q++V+D +++++ + E ++++ K G NV+L K I D+AL + + + ++ + +ED+ I K G V+ + F + +LGS ++ I G + V++++RGSN +++E ER++HDA+C ++ Sbjct: 205 LRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHI------DQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIR 413
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 54/216 (25.00%), Postives = 105/216 (48.61%), Query Frame = 1 Query: 70 IKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIM-IKGTKTTS-AVSLILRGSNDYMLDEMERALHDAICTVK 696 ++ I I+K G + D + G L + G+ RV AKI + F L K + Q++V+D +++++ + E ++++ K G NV+L K I D+AL + + + ++ + +ED+ I K G V+ + F + +LGS ++ I G + V++++RGSN +++E ER++HDA+C ++ Sbjct: 205 LRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHI------DQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIR 413
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 62/232 (26.72%), Postives = 105/232 (45.26%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTV 693 A L V+AV +K + + I I+K G S +SY G+ L P RV AKI + + K+++ G +V V ++ ++ E KE+++K+L NV + + I + + F +A +A+ E + +A G +VSTF ++ ++ GS + G K A S++LRG+ +LDE ER+LHDA+C + Sbjct: 174 AQLAVDAVLRLKGSGN-------LDAIQIIKKLGGSMNESYLDEGFLLEKL-PGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTF------DSPQTAQFGSCDLIEEIMIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVL 391
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 57/239 (23.85%), Postives = 107/239 (44.77%), Query Frame = 1 Query: 7 LVVEAVQAVKMT---NQRGEVKYPI---KGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 L ++AV+ V+ GE + I + + + K G DS L G LN M + ++ LD L+ K + + + + +I Q E + + E++L +++T KG+ D+A Y ++ G +RRV+K D IA+ TGAT+V+ D++ +S + + + K A +++LRG + +L+E++R L DA+ + + Sbjct: 174 LALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLK-----ESDVGTNCGLFKVEMIGDEYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVM 407
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 55/205 (26.83%), Postives = 93/205 (45.37%), Query Frame = 1 Query: 91 KAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 K G D L+G N M R+ +I LD L+ K + V +TD + + + E + + +++ ++++T KG+ D+A YF +A A RR+RK D +A+ATGAT+VS +E +S + + K A ++ILRG + +L+E+ER L DA+ V+ + Sbjct: 218 KIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVS-----RTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVV 417
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 59/235 (25.11%), Postives = 115/235 (48.94%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 A + V AV V +R +V + + I + G D+ + G ++ + MP +V AKIA L + K + ++ VT + + +++ E + +E I+++ + GAN+ + G DD A ++ AVR V ++ IA ATG +V F+++ E+ + L+ ++I+ K + AV++ +RG N +++E +R+LHDA+C ++ + Sbjct: 186 AEIAVNAVLTVADMERR-DVDFEL--IKVEGKVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLV----QEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLI 413
BLAST of FC931561 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 59/235 (25.11%), Postives = 115/235 (48.94%), Query Frame = 1 Query: 1 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSAVSLILRGSNDYMLDEMERALHDAICTVKRTL 705 A + V AV V +R +V + + I + G D+ + G ++ + MP +V AKIA L + K + ++ VT + + +++ E + +E I+++ + GAN+ + G DD A ++ AVR V ++ IA ATG +V F+++ E+ + L+ ++I+ K + AV++ +RG N +++E +R+LHDA+C ++ + Sbjct: 186 AEIAVNAVLTVADMERR-DVDFEL--IKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLV----QEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLI 413 The following BLAST results are available for this feature:
BLAST of FC931561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931561 ID=FC931561; Name=FC931561; organism=Citrus clementina; type=EST; length=706bpback to top |