FC931562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 1 Query: 148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + +V RTP + A LG + + L R ++DP L+ ++ FG V+ AR+ LG G+ S +V++ CA+ +A+ ++SI G D+ +AGG +S S P Sbjct: 15 IAVVAGLRTPFAKQATAFHGVPAVDLGKLVVSEMLARTDLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVSTDAYSVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLP 133
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 45/123 (36.59%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 145 DVCIVGVARTPM-----GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 495 D+ IV RT + GGF TL L + ++A ++R ++DPS V ++ G V++ +A R AA AG P+SV TVN+ C+SGL+A+ + SI+ G D+ + G+ESMS Sbjct: 50 DIVIVAAYRTAICKARRGGFKDTLPD----DLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 145 DVCIVGVARTPM-GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 DV IV RTP+ G L + + A +++ N++PS V ++ G VL+ +A R AA AG P +V TVN+ C+SGL+A+ + +I+ G D+ + G+ESM+ P Sbjct: 51 DVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNP 172
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP 125 The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bpback to top |