FC931562

Overview
NameFC931562
Unique NameFC931562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.955e-38
Identity = 83/165 (50.30%), Postives = 108/165 (65.45%), Query Frame = 1
Query:  142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAE 636
            +DV IV   RT +G F G+L+ + A +LG+  I   L++  +D   V EV  G VL+A  GQ PARQAA+ AG+P  V   T+NKVC SGLKA+ L +Q+I+ G  +VIVAGG E+MS AP  +  AR G R+GH  LVD M++DGLWD +ND  MG  AE  AE
Sbjct:    2 QDVVIVAATRTAVGSFQGSLAGIPAPELGAAVIRRLLEQTGLDAGQVDEVILGQVLTAGSGQNPARQAAIKAGLPVGVPAMTLNKVCGSGLKALHLGAQAIRCGDAEVIVAGGQENMSLAPYVMPGARTGLRMGHAKLVDSMIEDGLWDAFNDYHMGITAENLAE 166          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.430e-38
Identity = 86/165 (52.12%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  145 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYL-AEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAE 636
            +V IV   RTP+G F G LSS+SA  LG+I I+ A+KRAN++ +LV EV  GNVL A LGQ PARQAAL AGI   +   T+NKVC SGLK++ L +QSI  G  D++V GGME+MS AP  L ++ R+G ++G+ +L D M++DGL    N   MG  AE  AE
Sbjct:    3 NVVIVSAVRTPIGSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQNPARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQSIISGDADIVVVGGMENMSQAPYLLDSKVRQGVKMGNLTLRDTMIEDGLTCASNHYHMGITAENIAE 167          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_CHRVI (Acetyl-CoA acetyltransferase OS=Chromatium vinosum GN=phbA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37
Identity = 80/174 (45.98%), Postives = 111/174 (63.79%), Query Frame = 1
Query:  145 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            ++ IV   R+ +G F G+LSSLSAT++G+  ++  L R  + P  + EV  G VL+A +GQ PARQ  L AG+P+SV   T+NKVC SGLKA+ LA Q+I  G  D+++AGG ESMS +   L  +R G R+G  S+ D M+ DGLWD +N+  MGT AE  A+      +Q D
Sbjct:    4 NIVIVDAGRSAIGTFGGSLSSLSATEIGTAVLKGLLARTGLAPEQIDEVILGQVLTAGVGQNPARQTTLHAGLPHSVPAMTINKVCGSGLKAVHLAMQAIACGDADIVIAGGQESMSQSSHVLPRSRDGQRMGDWSMKDTMIVDGLWDAFNNYHMGTTAENIAQKYGFTREQQD 177          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.687e-37
Identity = 80/165 (48.48%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAE 636
            ++V I    RT +G +  +L  + A  LG+ AI+ A+K+A + P  V EV  GNVL A LGQ PARQA+  AG+P  +   T+NKVC SGL+ + LA+Q I+ G  DVI+AGGME+MS AP     AR G R+G+   VD M+ DGLWD +ND  MG  AE  AE
Sbjct:    2 KEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGLGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDAFNDYHMGITAENIAE 166          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36
Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS +P  +  +R G ++GH S+VD M+ DGL DV+N   MG  AE  AE      ++ D
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLAEQYGISREEQD 176          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36
Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 1
Query:  142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAE 636
            R+V I   ART +G F G   S+SA +LG  A + A+KRAN+ P ++ E   G VL+A LGQ  ARQ ALGAGIP      T+N VC SGL+++ +ASQ I LG  D+++ GG E+MS +P  +  AR G+R+G  + VD M+KDGL D++N+  MG  AE  AE
Sbjct:    2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAE 166          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.325e-36
Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAE 636
            + IV   RT +G F G LS+L AT +G+  ++A ++R  + P  V EV  G VL+A  GQ PARQ  L AG+P++V   T+NKVC SGLKA+ LA Q++  G  ++++AGG ESMS +   L  +R+G R+G   + D M+ DGLWD +N C MG  AE  A+
Sbjct:    5 IVIVDAGRTAIGTFGGALSALQATDIGTTVLKALIERTGIAPEQVSEVILGQVLTAGCGQNPARQTTLMAGLPHTVPAMTINKVCGSGLKAVHLAMQAVACGDAEIVIAGGQESMSQSSHVLPRSREGQRMGDWPMKDTMIVDGLWDAFNQCHMGVTAENIAK 167          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35
Identity = 79/173 (45.66%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS +P  +  +R G ++GH S+VD M+ DGL DV+N   MG  AE   E      ++ D
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQD 176          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35
Identity = 79/173 (45.66%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS +P  +  +R G ++GH S+VD M+ DGL DV+N   MG  AE   E      ++ D
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQD 176          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35
Identity = 79/173 (45.66%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS +P  +  +R G ++GH S+VD M+ DGL DV+N   MG  AE   E      ++ D
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQD 176          
The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ATOB_PSEAE1.955e-3850.30Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
ATOB_HAEIN7.430e-3852.12Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIL_CHRVI1.655e-3745.98Acetyl-CoA acetyltransferase OS=Chromatium vinosum... [more]
THLA_CLOAB3.687e-3748.48Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
THLA_STAAC4.077e-3646.24Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_CLOD64.077e-3647.88Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
THIL_THIVI5.325e-3645.40Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
THLA_STAAW1.186e-3545.66Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS1.186e-3545.66Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAR1.186e-3545.66Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionC34106E05EF PostHarvP1 Citrus clementina cDNA clone C34106E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bp
ATTTCCTCAGCACGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCT
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
ACCTAAATATTTGGCAGAAGCGAGAAAGGGGTCTCGACTTGGACATGATT
CTCTGGTTGATGGAATGCTTAAAGATGGATTATGGGATGTTTATAATGAT
TGTAGCATGGGAACTTGTGCTGAACTTTGTGCTGAACACATTNCATAACA
GGGAGATCAGGATGACTTT
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