FC931562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 59/168 (35.12%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHI 642 R V +V RTP G + G L +AT L A +AAL V P V V GNVL ++ AR L GIP T+N++C SG ++I+ Q I + +V++ GG ESMS AP + R G++LG D L+D LW D + + AE++ Sbjct: 5 RGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRTVRFGTKLGSDI----KLEDSLWVSLTDQHVQLPIAMTAENL 168
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 58/162 (35.80%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAE 624 R V IV RTP G + G L SAT L A AAL V P + V GNV+ ++ A AR L G+P T+N++C SG ++I+ Q I +V++ GG ESMS +P + R G++ G D ++ L GL D + MG AE Sbjct: 5 RGVFIVAAKRTPFGAYGGLLKDFSATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYCVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAE 166
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAE-LCAEHIX*QGDQDDF 669 R V IV RTP G + G L + T + A AAL V P V V GNV+ ++ AR L GIP T+N++C SG ++I+ Q I ++V++ GG ESMS AP + R G++LG + ++ L GL D + M AE L +H + D D + Sbjct: 5 RGVFIVAAKRTPFGAYGGLLKDFTPTDMAEFAARAALSAGRVSPETVDSVVVGNVMQSSSDAIYLARHVGLRVGIPKETPAITINRLCGSGFQSIVSGCQEICSRDSEVVLCGGTESMSQAPYCVRNIRFGTKLGSELKLEDTLWTGLTDTHVQMPMAITAENLAVKHQISREDCDRY 182
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.725e-19 Identity = 57/162 (35.19%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAE 624 R V IV RTP G + G L +AT L A AAL V P + V GNV+ ++ A AR L G+P T+N++C SG ++I+ Q I +V++ GG ESMS +P + R G++ G D ++ L GL D + MG AE Sbjct: 5 RGVFIVAAKRTPFGAYGGLLKDFTATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYSVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAE 166
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THL_CLODI (Acetyl-CoA acetyltransferase (Fragment) OS=Clostridium difficile GN=thi PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKA 420 R+V I ART +G F G S+SA +LG A + A+KRAN+ P ++ E G VL+A LGQ ARQ ALGAGIP T+N VC SGL++ Sbjct: 2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRS 94
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 49/137 (35.77%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 133 IKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN--APKYLAEARKGS 534 I DV +VG RTP+G G L SL +L + AI +++ +DP L++EV G+ LS+ G AR L AG+P +N++C SGL+++ L ++ I+ G ++ +AGG ESM++ PK +R G+ Sbjct: 2 ISHEDVVVVGALRTPIGRATRGKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGNVAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTSYGLPKEYTLSRGGA 138
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16 Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA 522 R+V I RTP+G F G+LS++ A L ++ ++A ++R VD S + EVF G A + AR A L AG+P SV T+N++CASG+ AI A ++I G ++ +AGG+ESMS AP + +A Sbjct: 3 REVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMSRAPYVMGKA 131
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 50/129 (38.76%), Postives = 81/129 (62.79%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA 522 R+V I RTP+G F G+L+++ A L ++ ++A ++R VD S + EV+ G A + AR A L AG+P+SV T+N++CASG+ A+ A ++I G ++++AGG+ESMS AP + +A Sbjct: 3 REVYICDAVRTPIGRFGGSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMSRAPYVMGKA 131
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 103 QMAPAAASDSIK--PRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 495 Q+ P A ++ P DV IV RT +G GF G+ S+ + + + ++ +K+ N+DPSL+++V GNVL+ G R A L AGIP + VN+ C+SGL AI + I+ G + +AGG ESMS Sbjct: 10 QLKPNAKQSILQKNPDDVVIVAAYRTAIGKGFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMS 143
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA 522 R+ I RTP+G + G LSS+ A L +I + E ++ +D + +V G A + AR A L AG+P SV TT+N++C SGL A+ A+++I+ G D+++AGG+ESMS AP + +A Sbjct: 2 REAFICDGIRTPIGRYGGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKA 130 The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bpback to top |