FC931562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 52/132 (39.39%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALK-RANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG 531 RDV I RTP+G F G L+ + A L ++ ++A ++ V V EVFFG A + AR A L AG+P S+ T+N++CASG+ AI A ++I G ++ +AGG+ESMS AP + +A G Sbjct: 2 RDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIEPNPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMSRAPFVMGKAESG 133
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 154 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*Q-GDQDDF 669 IV RTP G + G L+++ A LG+I I A ++R +V+ + V +V +G A + R +AL AG+P V TTVN++C S L AI +A+++I+ G +I+AGG+ESMS AP + ++ + ++ ++ + L +Y +M AE AE Q DQD F Sbjct: 6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQF 184
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 154 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*Q-GDQDDF 669 IV RTP G + G L+++ A LG+I I A ++R +V+ + V +V +G A + R +AL AG+P V TTVN++C S L AI +A+++I+ G +I+AGG+ESMS AP + ++ + ++ ++ + L +Y +M AE AE Q DQD F Sbjct: 6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQF 184
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 103 QMAPAAASDSIK--PRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 495 Q+ P A ++ P DV IV RT +G GF G+ ++ + + + ++ +K+ N+DPSL+++V GNVL+ G R A L AGIP + VN+ C+SGL AI + I+ G + +AGG ESMS Sbjct: 10 QLKPNAKQSILQKNPDDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMS 143
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 48/129 (37.21%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA 522 R+ I RTP+G + G LS + A L +I + E ++ +D + +V G A + AR A L AG+P SV TT+N++C SGL A+ A+++I+ G D+++AGG+ESMS AP + +A Sbjct: 2 REAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKA 130
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 S+ PRDV +V RTPMG G ++ A L + IEA +R +DP V++V +G V + G ARQ +L IP+ TVN++C S + AI A+Q+IQ G DV + GG+E M + P Sbjct: 2 SLNPRDVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGHVP 129
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 112 PAAASDSI---KPRDVCIVGVARTP-MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 PA D+I P DV I RT G G S+++L + +E +K + +DP L+ +V GNVL+A G R A L AGIP +V +N+ C+SGL A+ + I+ G D+ + G+ESMSN Sbjct: 15 PAKGLDAITSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSN 147
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLG------TLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 +DV IV RTPMG G LSA + SI L+ N+DP+ ++++++G V G AR AAL AGIP V TVN++C S ++A+ AS++IQ+G D+ + GG+E M + P Sbjct: 2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSIL----LRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14 Identity = 47/124 (37.90%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 +DV IV RTPMG G ++ A L + +++ L R N+DP+ ++++++G V G AR AAL AGIP V TVN++C S ++A+ AS++IQ+G D+ + GG+E M + P Sbjct: 2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMKSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S++PRDV IV ARTPMG G ++ A L + I L R A +DP+ + ++ +G V+ G AR L AG+P++V TVN++C S + A+ A+ +I G+ DV + GG+E M + Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGH 127 The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bpback to top |