FC931562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 142 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVL-SANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 ++ IV ARTP+G G+L+++ LG+I ++ LKRA + ++ G A G AR AG+P +V TVN+ C+SGL++I A++ I LG D +AGG ESMS P Sbjct: 2 KEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP 124
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ P+DV IV RTPMG G + A KL + I+A + R N D L ++V +G V + G AR ++ AG+P + TVN++C S ++A+ ASQSI G DV V GG+E M + Sbjct: 2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 ++V IV RTPMG G A L + ++ L+R NVDP+ ++++++G V G AR A+L AG+P S+ TTVN++C S ++A+ AS++I +G D+ + GG+E M + P Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 S+ PRDV ++ R+PMG G ++ A L + I+A R + VDP+ V+++ +G V + G ARQ +L IP++ TVN++C S + AI A+Q+I G DV V GG+E M + P Sbjct: 2 SLNPRDVVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVP 129
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 44/124 (35.48%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 ++V IV RTPMG G A L + ++ LKR +VDP+ ++++++G V G AR +AL AG+P S+ TTVN++C S ++A+ AS++I +G ++ + GG+E M + P Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 45/129 (34.88%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANLGQAP--ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 S+ PRD+ +V RT M G ++ A L + ++A R AN+ P+ V +V +G V + L Q+ AR AA+ GIP +V TVN++C S + A+ +A+ +I+ G+ D + GG+E M + P Sbjct: 2 SLNPRDIVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCV-NQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVP 129
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 44/124 (35.48%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 ++V IV RTPMG G A L + ++ LKR +VDP+ ++++++G V G AR +AL AG+P S+ TTVN++C S ++A+ AS++I +G ++ + GG+E M + P Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP 125 The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bpback to top |