FC931562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 +D+ IV RTPMG G A L + ++ L+R VDP ++++++G V G AR +AL AGIP+ V TVN++C S ++A+ A+++I G D+ +AGG+E M + P Sbjct: 2 KDIVIVDCIRTPMGRSKNGVFRHTRAEDLSAALMKGLLERNPEVDPEELEDIYWGCVQQTLEQGFNIARNSALIAGIPHKVAGVTVNRLCGSSMQALHDATRAIMNGDGDIFMAGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + A + + I L+R N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + A + + I L+R + +DP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKIDPKEVEDVIWGCVNQTMEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + A + + I L+R N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I DV V GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 130 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 S+ PRDV IV RTPMG G + + A + + I L+R N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I DV + GG+E M + Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 82 ADRDWH*QMAPA-AASDSIKPRDVCIV-----GVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPK 507 AD W Q AP + + DV +V + R GGF T + +L S + A LK N+ P + ++ GNVL G AR A + IP +V +TVN+ C+SGL+A+ + I+ G D+ +A G+ESMS A + Sbjct: 15 ADSGWMPQAAPCLSGAPQASAADVVVVHGRRTAICRAGRGGFKDT----TPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADR 158
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 142 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 + IV RTPMG G ++ A L + ++A L R VDP+ +++V +G V G AR A+L AG+P + TVN++C S ++A+ AS++I G+ D + GG+E M + P Sbjct: 2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 41/123 (33.33%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 145 DVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP 504 +V IV RTPMG G ++ A L + ++ + R +DP+ ++++++G V G AR A+L AGIP++V TTVN++C S ++A+ A+++I +G + + GG+E M + P Sbjct: 3 NVVIVDCIRTPMGRSKAGAFRNVRAEDLSAHLMKGLISRNPQLDPNSIEDIYWGCVQQTLEQGFNVARNASLLAGIPHTVAATTVNRLCGSSMQALHDATRAIMVGDAETCIIGGVEHMGHVP 125
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 133 IKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 498 + P DV I+ R+PMG G ++ A L + ++ KR NVD V+++ +G V + G AR +L AG+P + TVN++C S + AI A+Q+I G DV V GG+E M + Sbjct: 3 LNPNDVVIIDAVRSPMGKTKNGVFRNVRAENLSAALVKELFKRNPNVDQKDVEDLIWGCVNQTLEQGFNMARAVSLLAGLPITCAAQTVNRLCGSSMSAIHTAAQAIMTGQGDVFVVGGVEHMGH 127
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 103 QMAPAAAS-DSIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 495 Q AP +A DV +V RTP+G G + + +L S + A L+ + P + ++ GNVL G AR A +GIP +V +TVN+ C+SGL+A+ + I+ G D+ +A G+ESMS Sbjct: 22 QAAPCSARFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMS 154 The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bpback to top |