FC931571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36A_HUMAN (60S ribosomal protein L36a OS=Homo sapiens GN=RPL36A PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 3.155e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36A_BOVIN (60S ribosomal protein L36a OS=Bos taurus GN=RPL36A PE=3 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 3.155e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL44_AEDTR (60S ribosomal protein L44 OS=Aedes triseriatus GN=RpL44 PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 7.029e-38 Identity = 70/101 (69.31%), Postives = 85/101 (84.16%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPK ++TYCK +C+ H +HKVTQYKK K+ A+QG+RRYDRKQ G+GGQTKP+F KKAKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKK KG Sbjct: 1 MVNVPKQRRTYCK--KCKVHRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKG 99
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36L_HUMAN (60S ribosomal protein L36a-like OS=Homo sapiens GN=RPL36AL PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 7.029e-38 Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36L_PONAB (60S ribosomal protein L36a-like OS=Pongo abelii GN=RPL36AL PE=3 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.045e-37 Identity = 75/103 (72.82%), Postives = 85/103 (82.52%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL44_PLAF7 (60S ribosomal protein L44 OS=Plasmodium falciparum (isolate 3D7) GN=RPL44 PE=3 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 6.579e-36 Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 377 MVNVPKT+KTYC +K C+KHT+HKV+QYKKGK+ L++ G+RRYD KQ G+GGQTKPVF KKAKTTKKIVL+L+C CK +KRCK FE+G DKK KG +++ Sbjct: 1 MVNVPKTRKTYCSNK-CKKHTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKKGGAVY 104
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36A_DICDI (60S ribosomal protein L36a OS=Dictyostelium discoideum GN=rpl36a PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.579e-36 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 374 MVN+PK +KT+C +C KHT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLR++C C + Q +KRCK FE+GG+KK K ++ Sbjct: 1 MVNIPKARKTHCV--KCNKHTPHKVTQYKAGKPSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRMEC-SCGYKKQQVLKRCKRFELGGEKKSKNEAI 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL36A_PAPAN (60S ribosomal protein L36a OS=Papio anubis GN=RPL36A PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.764e-34 Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 365 MVNVPKT++T+CK + KH HKVTQYKKGKDSL A GKRRYDRKQSGYGG TKP+F KKAKTTKKIVLRL+C C+ KRCKHFE+GGDK KG Sbjct: 1 MVNVPKTRQTFCKKYD--KHQPHKVTQYKKGKDSLYALGKRRYDRKQSGYGGHTKPIFWKKAKTTKKIVLRLECVEPNCRSERMLATKRCKHFELGGDKTRKG 101
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL44_TRYBB (60S ribosomal protein L44 OS=Trypanosoma brucei brucei GN=RPL44 PE=3 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 1.517e-32 Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 356 MVN PK KK +C + C H KV QYK GK L A+GKRRYDRKQSGYGGQTKP+FHKKAKTTKKIVL+LQC CK + Q+ +KR KHFE+ KK Sbjct: 1 MVNYPKKKKMHCPDERCNAHKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKSIIQNVLKRTKHFELNDKKK 98
BLAST of FC931571 vs. ExPASy Swiss-Prot
Match: RL44_ENCCU (60S ribosomal protein L44 OS=Encephalitozoon cuniculi GN=RPL44 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.677e-29 Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 3 Query: 63 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSL 374 MVN+PKT+ T+CK +C+ ++ HKV+Q KK KD+ AQG RRY RKQ GYGGQTKP+ +KAK TKK+VL L+C CK Q P+KR KH GG++K KG +L Sbjct: 1 MVNIPKTRNTFCK--KCKGYSAHKVSQAKKSKDNPRAQGNRRYARKQRGYGGQTKPILRRKAKVTKKLVLNLECTKCKFSHQKPLKRAKHVIFGGERKRKGEAL 102 The following BLAST results are available for this feature:
BLAST of FC931571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931571 ID=FC931571; Name=FC931571; organism=Citrus clementina; type=EST; length=511bpback to top |