FC931572

Overview
NameFC931572
Unique NameFC931572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
PostHarvP1cdna_library
Homology
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37
Identity = 85/230 (36.96%), Postives = 139/230 (60.43%), Query Frame = 3
Query:   12 DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            D Y  T  +   V  + G+  + +D +  + LEAA+      L + E+PTNP L+ +D++  +   HK G I+ + D TF +   Q+ LSLGAD+ ++SATK++ G++DV+ G +S  SE L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+V+F + G L     F+  LK+  +A S
Sbjct:  112 DVYGGTNRYFRQVATEFGLKISFVDCSKPKLLEAAITPET-KLVWIETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNGYSDVVMGLVSLNSESLHDRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRMEKHFENGMAVAQFLESNPQVEKVIYPGLPSHPQHELAKRQCTGCPGMVTFYIKGSLQHAETFLQNLKLFTLAES 340          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37
Identity = 84/230 (36.52%), Postives = 139/230 (60.43%), Query Frame = 3
Query:   12 DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            D Y  T  +   V  + G+  + +D + ++ LEAA+      L + E+PTNP  + +D++  + + HK G I+ + D TF +P  Q+ L+LGAD+ ++SATK++ GH+DV+ G +S   E L  ++R L + LG   +P   YL  RG+KTLH+R+++     + +A+ LE++P V++V YPGL SHP+H +  +Q TG  G+V+F + G L     F+  LK+  +A S
Sbjct:  112 DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPET-KLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAES 340          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36
Identity = 84/230 (36.52%), Postives = 138/230 (60.00%), Query Frame = 3
Query:   12 DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            + Y  T  +   V  + G+  + +D +  + LEAA+      L + E+PTNP L+  D+K  + + HK K  I+ +D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+VSF + G L     F+  +K+  +A S
Sbjct:  111 EVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIKACAQIVHKHKDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVTSDDLNERLRFLQNSLGAVPSPFDCYLCCRGLKTLQIRMEKHFRNGMAVARFLESNPRVEKVIYPGLPSHPQHELAKRQCTGCPGMVSFYIKGTLQHAQVFLKNIKLFALAES 339          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36
Identity = 83/230 (36.09%), Postives = 138/230 (60.00%), Query Frame = 3
Query:   12 DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            + Y  T  +   V  + G+  + +D +  + LEAA+      L + E+PTNP L+  D+   + + HK+G I+ + D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L +++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE +P+V++V YPGL SHP+H +A +Q +G  G+VSF + G L     F+  LK+  +A S
Sbjct:  111 EVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIGACAQIVHKRGDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNSDDLNSRLRFLQNSLGAVPSPFDCYLCCRGLKTLQVRMEKHFKNGMAVARFLETNPRVEKVVYPGLPSHPQHELAKRQCSGCPGMVSFYIKGALQHAKAFLKNLKLFTLAES 339          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35
Identity = 84/232 (36.21%), Postives = 131/232 (56.47%), Query Frame = 3
Query:   12 DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSE-KLVTQI---RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            DCY  +    +++  +       +D  D + L AAL      L   ESP+NP LR VD+  +  L  + GA+  +D TF +P  Q  L+LGADLVLHS TK++ GH+DV+AG +   +  +VT++    N   V GGA +   +YL++RG++TL  R++     A  + K L+  P VK++++P L  +  H IA +Q  GFG ++SFE+DGD     +F+  L +  +A S
Sbjct:   99 DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKP-KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFD---SYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAES 326          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.831e-32
Identity = 83/223 (37.22%), Postives = 124/223 (55.61%), Query Frame = 3
Query:   48 VLPKMGITATVIDPADME-----------GLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 677
            VLP  G  A  +  A +E           G +A L+  +   L + E+P+NP L   DV+ + +  H  GA+V +D T ATPL Q+ L LGAD  + S TK + GH DVL G ++G +   +  +R    ++G    P  A+L  R + TL LRV +Q+STAL++A+ L   P++  + YPGL   P H +A+QQM  +G VVSF +     A  +F+DAL++
Sbjct:  116 VLPDDGYQALPLVRAQLEAYGIEVRTAPTGRDAQLDVLDGAKLLWIETPSNPGLDVCDVRRLVEAAHAGGALVAVDNTLATPLGQRPLELGADFSVASGTKQLTGHGDVLLGYVAGRDAGAMAAVRRWRKIVGAIPGPMEAWLAHRSIATLQLRVDRQDSTALKVAEALRTRPEITGLRYPGLPDDPSHKVASQQMLRYGCVVSFTLPSRARAD-RFLDALRL 337          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: METC_RHIL3 (Putative cystathionine beta-lyase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=metC PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32
Identity = 78/225 (34.67%), Postives = 127/225 (56.44%), Query Frame = 3
Query:   18 YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF--EVDGDLTATIK---FIDALKI 677
            Y  TR F +T+L ++G+      P    G+E  L  +N  L  TE+P +      D+  +S + H+ GA+V +D T+ATP+  + L  G D+ +H++TK+  GH+D+L G +S + +   +++  + VLG    P+ AY I+RG++T+ LR+++   +AL +AK LE    V RV +P L S P HH+  +   G  G+ SF    DG   +  K   F+DAL+I
Sbjct:  113 YGPTRHFCDTMLKRLGVEVEYYHPEIGAGIET-LFRSNTKLVHTEAPGSNTFEMQDIPAISAVAHRHGAVVMMDNTWATPVYFRPLDHGVDISIHASTKYPSGHSDILLGTVSANAEHWERLKEANGVLGICGAPDDAYQILRGLRTMGLRLERHYESALDIAKWLEGRDDVARVLHPALPSFPSHHLWKRDFKGASGIFSFVLAADGPEKSRAKAHAFLDALRI 336          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31
Identity = 80/221 (36.20%), Postives = 128/221 (57.92%), Query Frame = 3
Query:   90 ADMEGLEAALNNN-----------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA----IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTGF--GGVVSFEVDGDLTATIKFIDALKIPYIAPS 695
            A+  G+E +  N+           N  L + E+PTNP L+  D++ V+DL  K  A    I+ +D TF +P     L+ GAD+V+HSATK+I GH+DV+ G ++ + K L  +++ L + +G   +P  A+L  RG+KTLHLRV+Q   +A ++A+ L A  + V  V+YPGLK+HP + +  +Q      GG++SF + G   A  KF  + ++  +A S
Sbjct:  115 ANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAES 335          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 67/184 (36.41%), Postives = 111/184 (60.33%), Query Frame = 3
Query:    6 TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-CISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 554
            ++D Y  T    E    K G+T    D +D + L + +  N  ++F  E+PTNP ++  D++ ++ +  + G ++ +D TF TP+ Q+ L LGAD+V+HSATK++GGHND+LAG  +   E+L  ++    + +G  L P  ++L++RGMKTL LR++Q  + A  +A  LE   ++  V YPG
Sbjct:   96 SSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVF-VETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMRGMKTLSLRMRQHQANAQELAAFLEEQEEISDVLYPG 278          
BLAST of FC931572 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 79/260 (30.38%), Postives = 124/260 (47.69%), Query Frame = 3
Query:    6 TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL------------------------VTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKI 677
            T+  Y  T    +  LP++GIT   ++  D   L A ++ N  +++  ES  NP     D + ++++ H  G  + +D TF       + +  GAD+V HSATK+IGGH   + G I  S K                              NL +           +GG  NP   +L+++G++TL LR+++    A  +AK LE HPKV  V YPGL+SH  H +A + +  G+G V+SF   G    + K ++ALK+
Sbjct:  108 TSYLYGGTYNLFKVTLPRLGITTKFVNGDDPNDLAAQIDENTKAVY-VESIGNPMYNVPDFERIAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGGHGTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTETFGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKL 366          
The following BLAST results are available for this feature:
BLAST of FC931572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CGL_BOVIN3.956e-3736.96Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]
CGL_HUMAN5.166e-3736.52Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
CGL_RAT1.963e-3636.52Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]
CGL_MOUSE2.564e-3636.09Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
METB_ECOLI8.248e-3536.21Cystathionine gamma-synthase OS=Escherichia coli (... [more]
CYSA_STRCO3.831e-3237.22Putative cystathionine gamma-lyase OS=Streptomyces... [more]
METC_RHIL36.535e-3234.67Putative cystathionine beta-lyase OS=Rhizobium leg... [more]
CYS3_YEAST7.226e-3136.20Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
METB_BACSU1.968e-2836.41Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
CYSD_SCHPO1.410e-2630.38O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionC34106F04EF PostHarvP1 Citrus clementina cDNA clone C34106F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931572 ID=FC931572; Name=FC931572; organism=Citrus clementina; type=EST; length=696bp
GTGACACCACTGATTGCTACAGGAAGACTAGGATTTTCATTGAGACTGTT
CTGCCCAAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGA
AGGTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCG
AGTCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCA
GATCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGC
CACACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGC
ACTCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGC
ATTAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGT
TTTGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCA
TGAAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGG
ATGGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCC
AGGCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTG
GTTTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACGGCCACC
ATAAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATCCT
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