FC931575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1894_XANCB (UPF0061 protein xcc-b100_1894 OS=Xanthomonas campestris pv. campestris (strain B100) GN=xcc-b100_1894 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 293 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L +D+ +LPGDP REVL A ++ V P+ V P L+A+S VA L L ++ P F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQLK G Sbjct: 4 LQFDNRLRAQLPGDPEQGPRRREVL-AAWSAVRPTP-VAAPTLLAYSADVAQRLGLRAEDLASPQFAEVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGVDGGRYELQLKGAG 126
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: SELO_HUMAN (Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.497e-20 Identity = 62/136 (45.59%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD--PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L L +D+ +R LP G S PR V AC+T+V P+ + P+LVA SE L L P + LFFSG L GA P A CY GHQFG +AGQLGDG A+ LGE+ ERWELQLK G Sbjct: 45 LAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTRVQPTP-LRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAG 179
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2619_XYLFA (UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=XF_2619 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 293 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L +++ F+ LP DP R+VL A ++ V+P+ V P L+A+S VA L D +E P F FSG G PYA YGGHQFG W GQLGDGR ITLGE+L +ELQLK G Sbjct: 4 LRFNNRFIAVLPCDPEVSLRSRQVLEA-WSGVAPTP-VPVPCLLAYSSEVAAILNFDAEELVTPRFVEVFSGNALYPGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQLKGAG 126
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2392_XANAC (UPF0061 protein XAC2392 OS=Xanthomonas axonopodis pv. citri GN=XAC2392 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 293 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L +D+ ++LPGDP S REV A ++ V P+ V P L+A S +A L LD E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + R+ELQLK G Sbjct: 4 LRFDNRLRQQLPGDPEEGSRRREVSVA-WSAVLPTP-VAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAG 126
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: SELO_MOUSE (Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 60/136 (44.12%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFER--PDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L L +D+ +RELP G + + PR V AC+++ P A + P+LVA SE L L+ E + LFFSG L G P A CY GHQFG +AGQLGDG A+ LGE+ ERWELQLK G Sbjct: 46 LAGLRFDNRALRELPVETPPPGPEDSLATPRPVPGACFSRARP-APLRRPRLVALSEPALALLGLEASEEAEVEAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTAAGERWELQLKGAG 180
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2589_XANC5 (UPF0061 protein XCV2589 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV2589 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 293 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 L++D+ ++LPGDP + REV A ++ V P+ V P L+A S +A L L+ E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + R+ELQLK G Sbjct: 4 LHFDNRLRQQLPGDPEEGARRREV-GAAWSSVLPTP-VAAPYLIAHSAEMAQVLGLEAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAG 126
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2793_FLAJ1 (UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +++L ++ F ELP DP + R+V + ++ V+P+ + NP+L+ SE A + + +E +F FSG L PYA CY GHQFG WAGQLGDGRAI L E+ N + + LQLK G+ Sbjct: 1 MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPT-KPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVEN-NNTFYTLQLKGAGK 127
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: SELO_DANRE (Selenoprotein O OS=Danio rerio GN=selo PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 245 GGDESKMTKKLKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKE-FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSE-----------RWELQLKELG 667 G D+ ++ +LE L +D+ +++LP DP T+ R+V +C+++V P+ ++NP+ VA S L LD +E + P P + SG+ + G+ P A CY GHQFG +AGQLGDG A LGE+ + RWE+Q+K G Sbjct: 28 GMDDMGVSLSRSSLERLEFDNVALKKLPLDPSTEPGVRQVRGSCFSRVQPTP-LKNPEFVAVSAPALALLGLDAEEVLKDPLGPEYLSGSKVMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKAPAGQSPELLRENPTGRWEIQVKGAG 179
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y396_XANOP (UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_00396 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 + L++D+ ++LPG + REV A ++ V P+ V P L+A S +A L LD E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQLK G Sbjct: 1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAG 126
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2718_XANOR (UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. oryzae GN=XOO2718 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 + L++D+ ++LPG + REV A ++ V P+ V P L+A S +A L LD E F F G G P+A YGGHQFG WAGQLGDGRAI+LGE + + R+ELQLK G Sbjct: 1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAG 126 The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bpback to top |