FC931575

Overview
NameFC931575
Unique NameFC931575
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3596_BACAA (UPF0061 protein BAA_3596 OS=Bacillus anthracis (strain A0248) GN=BAA_3596 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3587_BACC3 (UPF0061 protein BCA_3587 OS=Bacillus cereus (strain 03BB102) GN=BCA_3587 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQITPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3567_BACAN (UPF0061 protein BA_3567/GBAA_3567/BAS3307 OS=Bacillus anthracis GN=BA_3567 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3523_BACC0 (UPF0061 protein BCAH820_3523 OS=Bacillus cereus (strain AH820) GN=BCAH820_3523 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3274_BACHK (UPF0061 protein BT9727_3274 OS=Bacillus thuringiensis subsp. konkukian GN=BT9727_3274 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQITPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3159_BACAH (UPF0061 protein BALH_3159 OS=Bacillus thuringiensis (strain Al Hakam) GN=BALH_3159 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQITPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1065_BACAC (UPF0061 protein BAMEG_1065 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=BAMEG_1065 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALCH (UPF0061 protein ydiU OS=Salmonella choleraesuis GN=ydiU PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            R+ L A YT + P+  ++N +L+ +++ +A  L +    F+  +    + G T L G  P AQ   GHQFG+WAGQLGDGR I LGE L       +  LK  G
Sbjct:   10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVCSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_ECO55 (UPF0061 protein ydiU OS=Escherichia coli (strain 55989 / EAEC) GN=ydiU PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            R+ L A YT +SP+  + N +L+  +  +A++L +    F+       + G T L G  P AQ Y GHQFG+WAGQLGDGR I LGE L       +  LK  G
Sbjct:   10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAG 110          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_ECO24 (UPF0061 protein ydiU OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydiU PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            R+ L A YT +SP+  + N +L+  +  +A++L +    F+       + G T L G  P AQ Y GHQFG+WAGQLGDGR I LGE L       +  LK  G
Sbjct:   10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAG 110          
The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
Y3596_BACAA2.167e-1140.21UPF0061 protein BAA_3596 OS=Bacillus anthracis (st... [more]
Y3587_BACC32.167e-1140.21UPF0061 protein BCA_3587 OS=Bacillus cereus (strai... [more]
Y3567_BACAN2.167e-1140.21UPF0061 protein BA_3567/GBAA_3567/BAS3307 OS=Bacil... [more]
Y3523_BACC02.167e-1140.21UPF0061 protein BCAH820_3523 OS=Bacillus cereus (s... [more]
Y3274_BACHK2.167e-1140.21UPF0061 protein BT9727_3274 OS=Bacillus thuringien... [more]
Y3159_BACAH2.167e-1140.21UPF0061 protein BALH_3159 OS=Bacillus thuringiensi... [more]
Y1065_BACAC2.167e-1140.21UPF0061 protein BAMEG_1065 OS=Bacillus anthracis (... [more]
YDIU_SALCH2.830e-1138.46UPF0061 protein ydiU OS=Salmonella choleraesuis GN... [more]
YDIU_ECO552.830e-1140.38UPF0061 protein ydiU OS=Escherichia coli (strain 5... [more]
YDIU_ECO242.830e-1140.38UPF0061 protein ydiU OS=Escherichia coli O139:H28 ... [more]

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Properties
Property NameValue
Genbank descriptionC34106F07EF PostHarvP1 Citrus clementina cDNA clone C34106F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bp
CTCAACTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTTCTTCTTCTT
CTCTCCGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACA
AAGTCTCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGG
CGGCGGTGCTGCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGC
ATGATTTGAAGAATCAGAGATTGGATACGGAAACGGAAACGGACGGCGGA
GATGAGAGCAAGATGACGAAGAAGCTGAAAGCTCTTGAGGATCTGAATTG
GGACCACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGACTGATTCTA
TCCCTCGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCT
GAAGTAGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTC
TCTTGAGTTGGATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTT
TTTCTGGGGCTACTCCTTTGGCGGGAGCGGTGCCATATGCTCAATGCTAC
GGTGGACATCAATTTGGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGC
AATAACTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGC
AGCTTAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTG
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