FC931575

Overview
NameFC931575
Unique NameFC931575
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3529_BACC7 (UPF0061 protein BCAH187_A3529 OS=Bacillus cereus (strain AH187) GN=BCAH187_A3529 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPAGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3304_BACCQ (UPF0061 protein BCQ_3304 OS=Bacillus cereus (strain Q1) GN=BCQ_3304 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL  +P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQMTPAGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1735_HERAR (UPF0061 protein HEAR1735 OS=Herminiimonas arsenicoxydans GN=HEAR1735 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 2
Query:  371 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI---LNLKSERWELQLKELG 667
            A YT + P+  +  P LV  S S A  + LD  + +   F   F+G     G+ P +  Y GHQFG+WAGQLGDGRAI LG++     + S R ELQLK  G
Sbjct:   27 AHYTALMPTP-LPAPYLVCASASAAALIGLDFSDIDSAAFIETFTGNRIPDGSRPLSAVYSGHQFGVWAGQLGDGRAILLGDVPAPTMIPSGRLELQLKGAG 127          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1090_BORPE (UPF0061 protein BP1090 OS=Bordetella pertussis GN=BP1090 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11
Identity = 45/118 (38.14%), Postives = 58/118 (49.15%), Query Frame = 2
Query:  314 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            +++LP D    ++P E     YT++ P      P+L+  +   A  + LDP EF    F   FSG  PL G    A  Y GHQFG+WAGQLG+ R    G         WELQLK  G
Sbjct:    6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGEVRGPAGG---------WELQLKGAG 109          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3222_BACCZ (UPF0061 protein BCE33L3222 OS=Bacillus cereus (strain ZK / E33L) GN=BCE33L3222 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            YT++ P+  V +P+LV  + S+A SL   P+E ++      F+G     GA P AQ Y GHQFG +   LGDGRA+ +GE +    +R+++QLK  G
Sbjct:   23 YTEIPPTP-VSSPELVKLNHSLAISLGFHPEELKKEAEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQITPSGKRFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y041_CLOP1 (UPF0061 protein CPF_0041 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=CPF_0041 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 2
Query:  407 ENPQLVAWSESVADSLELDPKEFERPDFPL-FFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670
            +NP+L+ ++ S+A+ L L+ +E    DF L  F+G     G VP AQ Y GHQFG +   LGDGRA+ LGE +   S+R+++QLK  GR
Sbjct:   35 KNPKLIKFNTSLAEELGLN-EEVLNSDFGLNIFAGNETFPGIVPIAQAYAGHQFGHFT-MLGDGRALLLGEHVTKDSKRYDVQLKGSGR 121          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3454_RHOPT (UPF0061 protein Rpal_3454 OS=Rhodopseudomonas palustris (strain TIE-1) GN=Rpal_3454 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670
            + +V+P+  V  P+L+  +  +A  L LDP   E P+     SG      A   A  Y GHQFG +  QLGDGRAI LGE+++    R ++QLK  GR
Sbjct:   19 FARVAPTP-VAAPRLIKLNRPLAVQLGLDPDLLETPEGAEILSGNQMPETAASIAMAYAGHQFGNFVPQLGDGRAILLGEVVDRNGVRRDIQLKGAGR 115          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3221_BACWK (UPF0061 protein BcerKBAB4_3221 OS=Bacillus weihenstephanensis (strain KBAB4) GN=BcerKBAB4_3221 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            +T++ P+  V +P+L+  + S+A SL  +P+E ++       +G T   GA P AQ Y GHQFG +   LGDGRA+ +GE +    ER+++QLK  G
Sbjct:   23 FTEIPPTP-VHSPELIKLNNSLAISLGFNPEELKKDAEIAILAGNTIPEGAHPLAQAYAGHQFGHF-NVLGDGRALLIGEQITPSGERFDIQLKGSG 117          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y308_SHEPA (UPF0061 protein Spea_0308 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=Spea_0308 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = 2
Query:  359 EVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF--FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667
            E L   Y++V P   + NP  +AWS+  AD +E+     ++P   L    SG   + GA  YAQ Y GHQFG ++ QLGDGR+I LGE L  +   W++ LK  G
Sbjct:    9 EQLPEFYSQVFPLG-ISNPHWLAWSQDAADLIEI-----KQPSDELLQGLSGNAHVDGASYYAQVYSGHQFGGYSPQLGDGRSIILGEALGPQG-AWDVALKGAG 106          
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3044_RHOPA (UPF0061 protein RPA3044 OS=Rhodopseudomonas palustris GN=RPA3044 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 2
Query:  377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670
            + +V+P+  V  P+L+  +  +A  L LDP   E P+     SG      A   A  Y GHQFG +  QLGDGRAI LGE+++    R ++QLK  GR
Sbjct:   19 FARVAPTP-VAAPRLIKLNRPLAVQLGLDPDLLETPEGAEILSGNQMPETAASIAMAYAGHQFGNFVPQLGDGRAILLGEVVDRNGVRRDIQLKGAGR 115          
The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
Y3529_BACC72.830e-1140.21UPF0061 protein BCAH187_A3529 OS=Bacillus cereus (... [more]
Y3304_BACCQ2.830e-1140.21UPF0061 protein BCQ_3304 OS=Bacillus cereus (strai... [more]
Y1735_HERAR2.830e-1143.14UPF0061 protein HEAR1735 OS=Herminiimonas arsenico... [more]
Y1090_BORPE2.830e-1138.14UPF0061 protein BP1090 OS=Bordetella pertussis GN=... [more]
Y3222_BACCZ3.697e-1140.21UPF0061 protein BCE33L3222 OS=Bacillus cereus (str... [more]
Y041_CLOP13.697e-1144.94UPF0061 protein CPF_0041 OS=Clostridium perfringen... [more]
Y3454_RHOPT6.305e-1139.80UPF0061 protein Rpal_3454 OS=Rhodopseudomonas palu... [more]
Y3221_BACWK6.305e-1139.18UPF0061 protein BcerKBAB4_3221 OS=Bacillus weihens... [more]
Y308_SHEPA6.305e-1140.95UPF0061 protein Spea_0308 OS=Shewanella pealeana (... [more]
Y3044_RHOPA6.305e-1139.80UPF0061 protein RPA3044 OS=Rhodopseudomonas palust... [more]

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Properties
Property NameValue
Genbank descriptionC34106F07EF PostHarvP1 Citrus clementina cDNA clone C34106F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bp
CTCAACTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTTCTTCTTCTT
CTCTCCGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACA
AAGTCTCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGG
CGGCGGTGCTGCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGC
ATGATTTGAAGAATCAGAGATTGGATACGGAAACGGAAACGGACGGCGGA
GATGAGAGCAAGATGACGAAGAAGCTGAAAGCTCTTGAGGATCTGAATTG
GGACCACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGACTGATTCTA
TCCCTCGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCT
GAAGTAGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTC
TCTTGAGTTGGATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTT
TTTCTGGGGCTACTCCTTTGGCGGGAGCGGTGCCATATGCTCAATGCTAC
GGTGGACATCAATTTGGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGC
AATAACTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGC
AGCTTAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTG
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