FC931575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2457_BURP1 (UPF0061 protein BURPS1710b_2457 OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_2457 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 335 PRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 PR D+ + L A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLK GR Sbjct: 24 PRDDAFQQ--LGAAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGR 135
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2336_BURP0 (UPF0061 protein BURPS1106A_2336 OS=Burkholderia pseudomallei (strain 1106a) GN=BURPS1106A_2336 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 335 PRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 PR D+ + L A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLK GR Sbjct: 24 PRDDAFQQ--LGAAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGR 135
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2140_BURTA (UPF0061 protein BTH_I2140 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=BTH_I2140 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 323 LPGDPRTDSIPRE----VLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 LP T + PR+ L A + P+A + P +V +S+ A L LDP + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE L R+ELQLK GR Sbjct: 14 LPDLAATLAAPRDGAFLQLGAAFLTRQPAAPLPAPYVVGFSDDAARMLGLDPALRDAPGFAGLFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGE-LEHDGRRYELQLKGAGR 135
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1877_BURM1 (UPF0061 protein Bmul_1366/BMULJ_01877 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1366 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 392 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 P+A + P +V +S+ VA L L +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLK GR Sbjct: 41 PAAPLAAPYVVGFSDEVARLLGLPASLAAQPGFAELFAGNPTRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGSGR 136
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1422_BURPS (UPF0061 protein BPSL1422 OS=Burkholderia pseudomallei GN=BPSL1422 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 335 PRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 PR D+ + L A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLK GR Sbjct: 24 PRDDAFQQ--LGAAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGR 135
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1826_BURA4 (UPF0061 protein BamMC406_1826 OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_1826 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 392 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 P+A + P +V +S+ VA L L +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQ+K GR Sbjct: 41 PAAPLPAPYVVGFSDEVAQLLGLPASFAAQPGFAELFAGNPTRDWPAHALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQIKGGGR 136
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1192_THISH (UPF0061 protein Tgr7_1192 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_1192 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 51/128 (39.84%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 284 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 LEDL + +S+ R LP A + + P A P VA++E A + L P+E R +F F+G PL G P + Y GHQFG++ QLGDGRA+ LGE+ + RWELQLK G Sbjct: 4 LEDLKFINSYAR-LP-------------EAFHDRPMP-APFPQPYRVAFNEKAAALIGLHPEEASRAEFVNAFTGQIPLTGMEPVSMIYAGHQFGVYVPQLGDGRALVLGEVQTPEGARWELQLKGSG 116
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2958_NITHX (UPF0061 protein Nham_2958 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=Nham_2958 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 338 RTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 R D+ + A Y +V P A P+L+ ++++A L +DP+ E P+ SG G+ P AQ Y GHQFG + QLGDGRAI LGE++++ +R++LQLK GR Sbjct: 20 RFDNTYARLPEAFYQRVEP-ATAAAPRLLRVNDALARQLRIDPQFLESPEGVAVLSGNVIAPGSEPIAQAYAGHQFGDFVPQLGDGRAILLGEVVDVAGKRYDLQLKGSGR 129
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3881_PSEU5 (UPF0061 protein PST_3881 OS=Pseudomonas stutzeri (strain A1501) GN=PST_3881 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +K L L++D+ F R GD + T+VSP +E P+LV SE+ L+LDP E E+ F FSG + A P A Y GHQFG + QLGDGR + LGE++N E W+L LK G+ Sbjct: 1 MKTLTQLHFDNRFARL--GDTFS------------TQVSPQP-LEAPRLVVASEAAMALLDLDPAEAEQALFAELFSGHKIWSTAEPRAMVYSGHQFGSYNPQLGDGRGLLLGEVVNEAGEYWDLHLKGAGK 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2107_BORBR (UPF0061 protein BB2107 OS=Bordetella bronchiseptica GN=BB2107 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 50/118 (42.37%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 314 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 +++LP D ++P E YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ + WELQLK G Sbjct: 6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG-PAGGWELQLKGAG 117 The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bpback to top |