FC931575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y5118_PSEPG (UPF0061 protein PputGB1_5118 OS=Pseudomonas putida (strain GB-1) GN=PputGB1_5118 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 54/132 (40.91%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +KAL+ L++D+ F R GD A T+V P E P+LV SES L+LDP E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LK G+ Sbjct: 1 MKALDQLSFDNRFARL--GD------------AFSTQVLPEPIAE-PRLVVASESAMALLDLDPAHAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQ 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y494_PSEU2 (UPF0061 protein Psyr_0494 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_0494 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +KAL++L +D+ F R GD + S+ E + A PQLV S+S L+L P++ + P F FSG + A P A Y GHQFG + +LGDGR + LGE+ N E W+L LK GR Sbjct: 1 MKALDELIFDNRFARL--GDAFSTSVLPEPIDA-------------PQLVVASQSALALLDLAPEQADLPLFAEIFSGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGR 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y4038_DECAR (UPF0061 protein Daro_4038 OS=Dechloromonas aromatica (strain RCB) GN=Daro_4038 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 47/100 (47.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 371 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 A YT++ P E P +V S VAD L L + P F F+G L G+ P A Y GHQFG+WAGQLGDGRA LG + N WE+QLK GR Sbjct: 24 AFYTRLEPHPLPE-PYVVGVSTEVADLLGLPAELMNSPQFAEIFAGNRLLPGSEPLAAVYSGHQFGVWAGQLGDGRAHLLGGLRN-DQGHWEIQLKGAGR 121
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y398_PSEPW (UPF0061 protein PputW619_0398 OS=Pseudomonas putida (strain W619) GN=PputW619_0398 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +KAL+ L +D+ F R GD A T+V P + +P+LV S+S L+LDP + + P F FSG GA P A Y GHQFG + +LGDGR + L E++N E W+L LK G+ Sbjct: 1 MKALDQLTFDNRFARL--GD------------AFSTQVLPEP-IADPRLVIASKSAMALLDLDPAQADTPVFAELFSGHKLWEGADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVVNDAGEHWDLHLKGAGQ 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y4511_AZOVD (UPF0061 protein Avin_45110 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_45110 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +K L +L +D+ F R GD + T V+P + +P+LV S + L+L+P + P + +G P GA P A Y GHQFG + QLGDGR + LGE++N ERW+L LK G+ Sbjct: 1 MKRLSELAFDNRFARL--GDTFS------------TAVTP-LPIASPRLVVASPAALALLDLEPAVADDPQLVEYCAGQCPWPGAEPRAMAYSGHQFGFYNPQLGDGRGLLLGEVINAAGERWDLHLKGAGK 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y444_PSEPF (UPF0061 protein Pfl01_0444 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0444 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +KAL++L +D+ F R D+ VL ++NP+LV S + L+LDP + +F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LK G+ Sbjct: 1 MKALDELTFDNRFAR------LGDAFSAHVL---------PEPIDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQ 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y485_PSE14 (UPF0061 protein PSPPH_0485 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_0485 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 50/132 (37.88%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +KAL++L +D+ F R GD + S+ E +E P+LV S+S L+L P++ + P F FSG + A P A Y GHQFG + +LGDGR + LGE N E W+L LK GR Sbjct: 1 MKALDELIFDNRFARL--GDAFSTSVLSE-------------PIETPRLVVASQSALALLDLAPEQADLPLFAEIFSGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEAYNDAGEHWDLHLKGAGR 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y444_PSEFS (UPF0061 protein PFLU_0444 OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_0444 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 51/131 (38.93%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 +KAL++L +D+ F R GD + + E L A P+LV S + L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LK G Sbjct: 1 MKALDELTFDNRFARL--GDAFSTHVLPEPLDA-------------PRLVVASPAAMALLDLDPSVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNEAGEHWDLHLKGAG 116
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2155_BURXL (UPF0061 protein Bxeno_A2155 OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_A2155 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 392 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 P+A + P +V +S A L L+P P F FSG A A+PYA Y GHQFG+WAGQLGDGRA+ LGE+ + R+ELQLK GR Sbjct: 41 PAAPLSAPYVVGFSAETAALLGLEPGIENDPAFAELFSGNATREWPAEALPYASVYSGHQFGVWAGQLGDGRALGLGEVEH-GGRRFELQLKGAGR 135
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y945_NITWN (UPF0061 protein Nwi_0945 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_0945 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 371 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 A Y +V P+A V P+L+ ++++A L +DP + P SG G+ P AQ Y GHQFG + QLGDGRAI LGE+++ +R+++QLK GR Sbjct: 31 AFYERVKPAA-VAAPRLLRVNDALARQLRIDPAFLKSPQGVAVLSGNEIAPGSDPIAQAYAGHQFGSFVPQLGDGRAILLGEVVDAAGKRFDIQLKGSGR 129 The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bpback to top |