FC931575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3358_BRASO (UPF0061 protein BRADO3358 OS=Bradyrhizobium sp. (strain ORS278) GN=BRADO3358 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 + +V+P+ V P+L+ + +A+ L L+P E E P+ +G T GA P A Y GHQFG + QLGDGRA+ LGE+++ R ++QLK G Sbjct: 19 FARVAPTP-VAAPRLIKLNRPLAEELGLNPAELETPEGAEILAGKTVPEGAEPIAMAYAGHQFGHFVPQLGDGRAVLLGEVVDRNGVRRDIQLKGSG 114
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3136_ROSDO (UPF0061 protein RD1_3136 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=RD1_3136 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 YT++ P+ V +P L+A++E + D L + + + FSGA GA P AQ Y GHQFG + QLGDGRAI LGE++ +R+++QLK G Sbjct: 19 YTRLKPTP-VRDPSLIAYNEPLGDILGISAAD--AAERAAVFSGAKLPEGAAPLAQLYAGHQFGNFNPQLGDGRAILLGEVIGTDGKRYDVQLKGSG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1035_RHOS1 (UPF0061 protein Rsph17029_1035 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=Rsph17029_1035 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 392 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 P+A V P+L+ + +A+ L LDP ER +F SG GA P AQ Y GHQFG ++ QLGDGRA+ +GEI + R +LQLK GR Sbjct: 21 PAAPVPAPRLLRLNRPLAEELGLDPDLLEREGAEIF-SGRRLPEGAHPLAQAYAGHQFGGFSPQLGDGRALLIGEITDRAGRRRDLQLKGSGR 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y945_AGRT5 (UPF0061 protein Atu0945 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu0945 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 404 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 V+ P+L+A++ ++A+ L LD + + FSG GA P A Y GHQFG + QLGDGRAI LGE++++ R ++QLK G Sbjct: 24 VKAPRLIAFNRTLAEELLLDVADLDDDRLAAIFSGNVVPQGAEPLAMAYAGHQFGGFVPQLGDGRAILLGEVIDVNGRRRDIQLKGSG 111
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y4238_COLP3 (UPF0061 protein CPS_4238 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=CPS_4238 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 359 EVLHACYTKVSPSAEVENPQLVAWSESVADSLELD-PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 + L +++ + A V P L+ W+E +A +L + K+ + +FSG + G+ P AQ Y GHQFG + QLGDGRA LG+I + + +RW++QLK G Sbjct: 10 QALGESFSQQTLPAPVGQPSLLLWNEPLAKALTIPFTKDNDAELLSQYFSGNQLIEGSKPVAQAYSGHQFGHFNPQLGDGRAHLLGDIADTQGQRWDIQLKGSG 113
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2020_PHOPR (UPF0061 protein PBPRA2020 OS=Photobacterium profundum GN=PBPRA2020 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 404 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 + +P LV+ + VA+ LELDP E + F F+G LAG P A Y GHQFG + LGDGR + LGE+L + +W++ LK G+ Sbjct: 29 LSDPFLVSVNPQVAEMLELDPLEAKTRLFINSFTGNKELAGTAPLAMKYTGHQFGHYNPDLGDGRGLLLGEVLTSTNAKWDIHLKGSGK 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALTY (UPF0061 protein ydiU OS=Salmonella typhimurium GN=ydiU PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALTI (UPF0061 protein ydiU OS=Salmonella typhi GN=ydiU PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGIWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALPK (UPF0061 protein ydiU OS=Salmonella paratyphi A (strain AKU_12601) GN=ydiU PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALPB (UPF0061 protein ydiU OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ydiU PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112 The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bpback to top |