FC931575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALSV (UPF0061 protein ydiU OS=Salmonella schwarzengrund (strain CVM19633) GN=ydiU PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALPC (UPF0061 protein ydiU OS=Salmonella paratyphi C (strain RKS4594) GN=ydiU PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTL-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: YDIU_SALAR (UPF0061 protein ydiU OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ydiU PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 356 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LK G Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAG 112
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y5413_PSEA8 (UPF0061 protein PLES_54131 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_54131 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +K+L+DL++D+ F R L G T+ +P P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LK G+ Sbjct: 1 MKSLDDLDFDNRFAR-LGGAFSTEVLP-----------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQ 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y5023_PSEAE (UPF0061 protein PA5023 OS=Pseudomonas aeruginosa GN=PA5023 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 275 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +K+L+DL++D+ F R L G T+ +P P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LK G+ Sbjct: 1 MKSLDDLDFDNRFAR-LGGAFSTEVLP-----------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQ 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y3522_BACC1 (UPF0061 protein BCE_3522 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_3522 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 368 HACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 H+ YT++ P+ V +P+LV + S+A SL +P+E ++ F+G GA P AQ Y GHQFG + LGDGRA+ +GE + +R+++QLK G Sbjct: 20 HSFYTEIPPTP-VSSPELVKLNHSLAISLGFNPEELKKETEIAIFAGNALPEGAHPLAQAYAGHQFGHF-NMLGDGRALLIGEQITPSGKRFDIQLKGSG 117
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2948_RHOPS (UPF0061 protein RPD_2948 OS=Rhodopseudomonas palustris (strain BisB5) GN=RPD_2948 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 + +V+P+ V P+L+ + +A+ L LDP + P+ +GA GA A Y GHQFG + QLGDGRAI LGE+++ R ++QLK GR Sbjct: 19 FARVAPTP-VAAPRLIKLNRPLAERLGLDPDWLDSPEGAEILAGARLPEGAASIAMAYAGHQFGQFVPQLGDGRAILLGEVIDRDGVRRDIQLKGSGR 115
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y1802_JANSC (UPF0061 protein Jann_1802 OS=Jannaschia sp. (strain CCS1) GN=Jann_1802 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 +T++SP E P L+A + +A+ L + E + LF P+ GA P AQ Y GHQFG W+ QLGDGRA+ LGE++ R+++QLK G+ Sbjct: 19 FTRMSPKPVAE-PGLIAVNRPLAERLGITLGESDAELAQLFAGNVVPM-GAAPLAQVYAGHQFGGWSQQLGDGRAVMLGEVVAPDGARFDVQLKGAGQ 114
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y2424_ALCBS (UPF0061 protein ABO_2424 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ABO_2424 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 338 RTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELGR 670 R D+ R + A ++ P V P V +++++A L LD + + P FFSG LAG+ P AQ Y GHQFG LGDGRA+ LGE L+ +R ++QLK GR Sbjct: 8 RFDNTYRRLPEALFSDCLPQP-VSTPAFVLFNDNLAQELGLDSEALS--EHPEFFSGNELLAGSEPIAQAYAGHQFGSLT-MLGDGRAVLLGEQLDGHGQRHDIQLKGAGR 114
BLAST of FC931575 vs. ExPASy Swiss-Prot
Match: Y5348_METC4 (UPF0061 protein Mchl_5348 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=Mchl_5348 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 377 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKELG 667 + +V+P+A VE P+L+ + ++A L LDP E P+ +G GA P A Y GHQFG + QLGDGRAI LGE++ + R ++QLK G Sbjct: 19 FGRVAPTA-VEAPRLIRLNRALAVDLGLDPDRLESPEGVEVLAGQRVPEGAEPLAAAYAGHQFGQFVPQLGDGRAILLGEVVG-RDGRRDIQLKGSG 113 The following BLAST results are available for this feature:
BLAST of FC931575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931575 ID=FC931575; Name=FC931575; organism=Citrus clementina; type=EST; length=691bpback to top |