FC931577

Overview
NameFC931577
Unique NameFC931577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            +DW +T +A+VLKA+LPG+ K +V+V VE+G++++ISG+   +++ +   W         F+RR  LPE+A   + +A + N V L + +PK
Sbjct:   47 IDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGV-LTVVVPK 137          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 34/94 (36.17%), Postives = 58/94 (61.70%), Query Frame = 1
Query:  289 SSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            + VDW +T +A+V KA++PG+ K +V+V VE+G I++ISG+   + + ++  W         F+RR  LPE+A   + +A + N V L + +PK
Sbjct:   49 AKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGV-LSVTVPK 141          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  211 FDPSDAFPLWEFESDVLLSHLQSTGQSS--------VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            FDP  +  LW+    V  S + +T  +         +DW +T +++V KA+LPGV K +V+V VE G ++ ISGQ  ++++ +   W         F+RR  LPE+A   + +A + N V L + +PK
Sbjct:   10 FDPF-SLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGV-LTVTVPK 135          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            VDW +T +A+V KA+LPG+ K +V+V VE+ ++++ISG+   +++ +  +W         F+RR  LPE+A   K +A + N V L + +PK
Sbjct:   53 VDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGV-LTVTVPK 143          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 42/137 (30.66%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  190 PLLFG----KFFDPSDAFPLWEFESDVLLSHLQSTGQSS------VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            P +FG      FDP  +  +W+   D  +     + ++S      VDW +T +A+VLKA++PG+ K +V+V +E+ ++++ISG+   +++ +   W         F+RR  LPE+A   + +A + N V L + IPK
Sbjct:    5 PSIFGGPRSNVFDPF-SLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGV-LTVTIPK 139          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 37/117 (31.62%), Postives = 67/117 (57.26%), Query Frame = 1
Query:  220 SDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            S +FP +  E+   +S       + VDW +T +A+V KA++PG+ K +V+V +E+ K+++ISG+   +++ +   W         F+RR  LPE+A   + +A + N V L + +PK
Sbjct:   38 SASFPEFSRENSAFVS-------TRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGV-LTVTVPK 146          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  211 FDPSDAFPLWEFESDVLL---SHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            +DP D FP       +     S   +   + +DW +T +A+V KA++PG+ K +V+V VE+G +++ISG+  ++++ +   W         F+RR  LPE+    + +A + N V L + +PK
Sbjct:   18 WDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGV-LTVTVPK 139          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 1
Query:  166 FGDGSLFSPLLFGKF-FDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            FG+    +  +F  F  D  D F   +F S    S   +   + VDW +T +A+V KA+LPG+ K +V+V +E+  +++ISG+   +++ +   W        GF R+  LPE+    + +A + N V L + +PK
Sbjct:    8 FGNNRRINNNIFDPFSLDVWDPFKELQFPS----SSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGV-LTVTVPK 138          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  175 GSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTGQSS--------VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            G+ F P      +DP D FP     S      L     S         +DW +T + +V KA++PG+ K +V+V V++G I++ISG+   +++ ++  W         F+RR  LPE+    + +A + N V L + +PK
Sbjct:    7 GNAFDPFSLD-LWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGV-LTVTVPK 144          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 1
Query:  265 SHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            S   +   + +DW +T +A+V KA+LPGV K +V+V VE+G ++ +SG+  ++++ +   W         FVRR  L EDA   + +A L N V L + +PK
Sbjct:   36 SETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGV-LTVTVPK 136          
The following BLAST results are available for this feature:
BLAST of FC931577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HSP11_HELAN4.516e-1236.9617.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP17_ARATH5.898e-1236.1717.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16B_ORYSJ5.898e-1232.8116.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HSP11_PEA7.703e-1236.9618.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP15_SOYBN1.314e-1130.6617.6 kDa class I heat shock protein OS=Glycine max... [more]
HSP16_SOYBN1.716e-1131.6218.5 kDa class I heat shock protein OS=Glycine max... [more]
HS174_ORYSJ1.716e-1130.0817.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS17A_ARATH2.927e-1130.1517.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HS177_ORYSJ2.927e-1129.2917.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_WHEAT2.927e-1135.2916.9 kDa class I heat shock protein 2 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank descriptionC34106F09EF PostHarvP1 Citrus clementina cDNA clone C34106F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931577 ID=FC931577; Name=FC931577; organism=Citrus clementina; type=EST; length=703bp
GAAGGAAAATTTTTGCAATTTTCGGTCTTCTAGTCTGGAATGACTAGTTG
CATAAAGCTTGAAGTTCATACAGATGATCGCACTCCGCATAAATGGATTG
TTGCATTAGGCGAAGACGTGTTCAGAAGATTTCTCTCCCAGGGAAATCCC
GCTGTGCATAAGGCATTTGGCGATGGCTCTCTGTTCAGTCCATTGTTGTT
CGGAAAATTCTTTGATCCATCTGATGCCTTTCCTCTCTGGGAATTTGAGT
CAGATGTTTTGTTATCTCATCTTCAGAGCACTGGCCAGAGTTCTGTTGAT
TGGCTTCAGACAGACCAAGCTTATGTGCTAAAAGCAGAACTGCCGGGAGT
TGGGAAAAACCAAGTGCAAGTCTCTGTCGAAAATGGGAAGATTGTGGAAA
TTTCTGGGCAGTGGAAGGAGCAGAGAGATCCGAGGGCAAAGGACTGGAGA
AGTGGCCATTGGTGGGAACATGGATTTGTTCGGAGGCTTGAGCTGCCGGA
AGATGCAGACTGGAGGAAAACAGAAGCGTATTTGAGTAACGACGTGTTTC
TGGAAATCAGAATTCCCAAGAATCCTTCAACTTGTGATATTTCCCACGGA
AATGGTGCCGCGACAAAAAATTCTGAAGCAATGTAAGTTTGAGGAGGGTG
ATACATTCTGCTACTTGAAAAACAAATCTGACAAAAAAAAAAAAAAAAAA
AAA
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