FC931577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 38/130 (29.23%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 211 FDPSDAFPLWE---FESDVLLSHLQSTGQSS-------VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570 +DP D FP + S + T + +DW +T +A+V KA++PG+ K +V+V VE+G +++ISG+ ++++ + W F+RR LPE+ + +A + N V L + +PK Sbjct: 18 WDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGV-LTVTVPK 146
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 38/130 (29.23%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 211 FDPSDAFPLWEFESDV----------LLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570 +DP D FP S S + + +DW +T +A+V KA++PG+ K +V+V V++G I++ISG+ ++++ + W F+RR LP++A + +A + N V L + +PK Sbjct: 18 WDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGV-LTVTVPK 146
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 32/92 (34.78%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570 VDW +T +A+V KA+LPG+ K +V+V +E+ ++++ISG+ +++ + W F+RR LPE+A + +A + N V L + +PK Sbjct: 53 VDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGV-LTVTVPK 143
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 31/92 (33.70%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570 +DW +T +A+V KA+LPG+ K +V+V +E+ ++++ISG+ +++ + W F+RR LPE+A + +A + N V L + +PK Sbjct: 38 IDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGV-LTVTVPK 128
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 32/92 (34.78%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570 +DW +T +A+V KA+LPG+ K +V+V VE ++++ISG+ +++ + W F+RR LPE+A + +A + N V L + +PK Sbjct: 49 IDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGV-LTVTVPK 139 The following BLAST results are available for this feature:
BLAST of FC931577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931577 ID=FC931577; Name=FC931577; organism=Citrus clementina; type=EST; length=703bpback to top |