FC931591

Overview
NameFC931591
Unique NameFC931591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 2.255e-40
Identity = 87/149 (58.39%), Postives = 102/149 (68.46%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K    D VLVGG++ I KV+ L+++FFNGK+  K INPDE           +LSGE  E  +D             ET GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  362 KSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGE--EGTEDIVLMDVNPLTLGIETTGGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQIEV 508          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 5.024e-40
Identity = 84/151 (55.63%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K + HD VLVGG++ I K+++LLQD F GK+L  SINPDE           IL+G G+ ++QD             ETAGGVMT L+ RN  IP K++Q+F+TYSDNQ  V IQVYEGER  T+DNNLLG F L+GIPPAPRGVPQI V
Sbjct:  327 MDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRGVPQIEV 477          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.562e-40
Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    D VLVGG++ I KV+ LL++FF GK+  K INPDE           +LSGE  E   D             ET GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  370 VKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE--EGTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.562e-40
Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    D VLVGG++ I KV+ LL++FF GK+  K INPDE           +LSGE  E   D             ET GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  370 VKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE--EGTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.562e-40
Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    D VLVGG++ I KV+ LL++FF GK+  K INPDE           +LSGE  E   D             ET GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  370 VKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE--EGTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEV 518          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 8.570e-40
Identity = 89/150 (59.33%), Postives = 105/150 (70.00%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K S H+ VLVGG++ I ++++L+ DFFNGKE  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIP A RGVPQI V
Sbjct:  327 KSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPRA-RGVPQIEV 475          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.909e-39
Identity = 92/151 (60.93%), Postives = 103/151 (68.21%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K   HD VLVGG++ I K+++LLQDFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVL QVYE     T+DNNLLGKFEL+GIPPA    PQI V
Sbjct:  326 MDKGQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLNQVYE-VGAMTKDNNLLGKFELTGIPPA-LWCPQIEV 474          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.909e-39
Identity = 84/144 (58.33%), Postives = 101/144 (70.14%), Query Frame = 1
Query:   46 DDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            D V VGG++ I KV++L+++FFNGK++ K INPDE           +LSGE  E V+D             ET+GGVMT LI RNT IPT+K Q+FST +DNQP VLIQVYEGER   +DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  368 DVVFVGGSTRIPKVQELIENFFNGKKISKGINPDEAVAFGAAVQGGVLSGE--EGVEDIVLIDVNPLTLGIETSGGVMTTLIKRNTPIPTQKSQIFSTAADNQPVVLIQVYEGERAMAKDNNLLGKFELTGIPPAPRGVPQIEV 509          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.493e-39
Identity = 81/142 (57.04%), Postives = 101/142 (71.13%), Query Frame = 1
Query:   52 VLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            VLVGG++ I K+++LLQ+F NGKEL KSINPDE           ILSG+ +++++D             ETAGGVM+ +I RNT +PTK  Q F+TYSDNQPGV IQV+EGER  T+DNN LG+FELSGIPPAPRG P+I V
Sbjct:  335 VLVGGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDVLLVDVAPLSLGIETAGGVMSKIIERNTRVPTKASQTFTTYSDNQPGVSIQVFEGERAMTKDNNRLGQFELSGIPPAPRGRPKIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.257e-39
Identity = 86/151 (56.95%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            + K    D VLVGG++ I KV+QLL+ FFNGK+  K INPDE           +LSGE  E V+D             ET GGVMT LI RNT IPTKK Q+FST  DNQP V I+VYEGER  ++DNNLLGKFEL+GIPPAPRG+PQI V
Sbjct:  357 LEKKDIDDFVLVGGSTRIPKVQQLLESFFNGKKASKGINPDEAVAYGAAVQAGVLSGE--EGVEDIVLLDVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVQIKVYEGERAMSKDNNLLGKFELTGIPPAPRGIPQIEV 505          
The following BLAST results are available for this feature:
BLAST of FC931591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_NEUCR2.255e-4058.3978 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP7B_DROME5.024e-4055.63Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
GRP78_ASPNG6.562e-4057.6278 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA6.562e-4057.6278 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW6.562e-4057.6278 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP70_AJECA8.570e-4059.33Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP7C_ORYLA1.909e-3960.93Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
GRP78_PICAN1.909e-3958.3378 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP74_PARLI2.493e-3957.04Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
GRP78_CANGA3.257e-3956.9578 kDa glucose-regulated protein homolog OS=Candid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34106H01EF PostHarvP1 Citrus clementina cDNA clone C34106H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931591 ID=FC931591; Name=FC931591; organism=Citrus clementina; type=EST; length=478bp
ATTTAATTTTAAGATCTGTCCTAGATGCGAAAGATGTCATCCCATGATGA
TGTTCTTGTCGGTGGAGCTAGTATGATTCGGAAAGTCCGGCAACTTTTGC
AAGATTTCTTTAATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAG
GCTGTTGCCTATGGTGCTGCTGTGCGAGCTGCTATCTTGAGTGGTGAGGG
TAATGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCGCACCTCTCTCCC
TTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAAC
ACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAA
CCAACCTGGTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCA
GGGACAATAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCCCCAGCT
CCTAGGGGTGTTCCTCAAATCACTGTGT
back to top