FC931591

Overview
NameFC931591
Unique NameFC931591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.334e-37
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    + VLVGG++ I K++QL+++FFNGKE  + INPDE           +LSG+  +   D             ET GGVMT LIPRNT +PTKK Q+FST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V
Sbjct:  349 LKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEV 497          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.334e-37
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    + VLVGG++ I K++QL+++FFNGKE  + INPDE           +LSG+  +   D             ET GGVMT LIPRNT +PTKK Q+FST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V
Sbjct:  352 LKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEV 500          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.334e-37
Identity = 80/151 (52.98%), Postives = 99/151 (65.56%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    + VLVGG++ I KV+QLL+D+F+GKE  K +NPDE           ILSGEG ++ +D             ET GGVMT  IPRNT IPTKK QVF+TY D Q  V IQV+EGER+ T+D   LGKF+L+GIPPAPRG PQI V
Sbjct:  358 LQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKFIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLTGIPPAPRGTPQIEV 508          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 3.981e-37
Identity = 81/151 (53.64%), Postives = 101/151 (66.89%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K   H+ VLVGG++ I KV+QL+++FFNGKE  + INPDE           ++SGE  E   +             ET GGVMT LI RNT IPTKK QVFST +DNQP V IQV+EGER  T+DN+ LGKF+L+G+PPAPRGVPQI V
Sbjct:  356 LKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEV 504          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.981e-37
Identity = 80/151 (52.98%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    D VLVGG++ I K++QL+++FFNGKE  + INPDE           ++SG   E   D             ET GGVMT LIPRNT IPTKK Q+FST +DNQP V IQV+EGER  T+DN+ LGKF+L+GIPPAPRG+PQI V
Sbjct:  350 LKKEDIDDIVLVGGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYGAAVQAGVISGV--EDTGDIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEV 498          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.199e-37
Identity = 81/150 (54.00%), Postives = 97/150 (64.67%), Query Frame = 1
Query:   28 RKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            +K   H+ VLVGG++ I K++QLL+DFFNGKE  + ++PDE           I + E  E                 ET GGVMT LIPR T +PTKK QVFSTY DNQ  V IQ+YEGER+ T+DNNLLGKF+LSGIPPA RGVPQI V
Sbjct:  355 KKSQIHEVVLVGGSTRIPKIQQLLKDFFNGKEPNRGVHPDEAVAYGAAVQGGIFTNE--EGTDTLVLLDIAPLTLGIETVGGVMTALIPRGTFVPTKKSQVFSTYQDNQDRVSIQIYEGERSMTKDNNLLGKFDLSGIPPAQRGVPQIEV 502          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 6.790e-37
Identity = 81/155 (52.26%), Postives = 102/155 (65.81%), Query Frame = 1
Query:   13 DLS*MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            D S ++K    + VLVGG++ I K++QL+++ FNGKE  + INPDE           +LSG+  +   D             ET GGVMT LIPRNT +PTKK Q+FST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V
Sbjct:  348 DDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEV 500          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_PIG (78 kDa glucose-regulated protein (Fragment) OS=Sus scrofa GN=HSPA5 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 6.790e-37
Identity = 79/142 (55.63%), Postives = 97/142 (68.31%), Query Frame = 1
Query:   52 VLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            VLVGG++ I K++QL+++FFNGKE  + INPDE           +LSG+  +   D             ET GGVMT LIPRNT +PTKK Q+FST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V
Sbjct:    4 VLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEV 143          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 6.790e-37
Identity = 80/151 (52.98%), Postives = 98/151 (64.90%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            + K    + VLVGG++ I KV+QLL+D+F+GKE  K +NPDE           ILSGEG ++ +D             ET GGVMT LIPRNT IPTKK QVF+TY D Q  V I V+EGER+ T+D  LLGKF+L+GI PAPRG PQI V
Sbjct:  358 LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEV 508          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.976e-36
Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            ++K    + VLVGG++ I K++QL+++FFNGKE  + INPDE           +LSG+  +   D             ET GGVMT LIPRNT +PTKK Q+ ST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V
Sbjct:  351 LKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQISSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEV 499          
The following BLAST results are available for this feature:
BLAST of FC931591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_CHICK2.334e-3752.9878 kDa glucose-regulated protein OS=Gallus gallus ... [more]
GRP78_BOVIN2.334e-3752.9878 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
BIP_SOLLC2.334e-3752.98Luminal-binding protein OS=Solanum lycopersicum PE... [more]
HSP7C_CAEEL3.981e-3753.64Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
GRP78_ECHGR3.981e-3752.9878 kDa glucose-regulated protein OS=Echinococcus g... [more]
BIP2_DICDI5.199e-3754.00Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_XENLA6.790e-3752.2678 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_PIG6.790e-3755.6378 kDa glucose-regulated protein (Fragment) OS=Sus... [more]
BIP5_TOBAC6.790e-3752.98Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
GRP78_SPETR1.976e-3652.3278 kDa glucose-regulated protein OS=Spermophilus t... [more]

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Properties
Property NameValue
Genbank descriptionC34106H01EF PostHarvP1 Citrus clementina cDNA clone C34106H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931591 ID=FC931591; Name=FC931591; organism=Citrus clementina; type=EST; length=478bp
ATTTAATTTTAAGATCTGTCCTAGATGCGAAAGATGTCATCCCATGATGA
TGTTCTTGTCGGTGGAGCTAGTATGATTCGGAAAGTCCGGCAACTTTTGC
AAGATTTCTTTAATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAG
GCTGTTGCCTATGGTGCTGCTGTGCGAGCTGCTATCTTGAGTGGTGAGGG
TAATGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCGCACCTCTCTCCC
TTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAAC
ACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAA
CCAACCTGGTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCA
GGGACAATAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCCCCAGCT
CCTAGGGGTGTTCCTCAAATCACTGTGT
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