FC931591

Overview
NameFC931591
Unique NameFC931591
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.238e-47
Identity = 96/149 (64.43%), Postives = 109/149 (73.15%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   HD VLVGG++ I KV++LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  328 KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.238e-47
Identity = 96/149 (64.43%), Postives = 109/149 (73.15%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   HD VLVGG++ I KV++LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  328 KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 7.238e-47
Identity = 97/151 (64.24%), Postives = 109/151 (72.19%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K   HD VLVGG++ I KV++LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  326 MDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 7.238e-47
Identity = 96/149 (64.43%), Postives = 109/149 (73.15%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   HD VLVGG++ I KV++LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  328 KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 9.453e-47
Identity = 96/149 (64.43%), Postives = 107/149 (71.81%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   HD VLVGG++ I K+++LLQDFFNG+EL KSINPDE           +L G+  EKVQD             ETAGGVMT LI RN TIPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  330 KAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 478          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 9.453e-47
Identity = 97/149 (65.10%), Postives = 109/149 (73.15%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   H+ VLVGG++ I KV++LLQDFFNG+EL KSINPDE           IL G+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  329 KSQIHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEV 477          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 9.453e-47
Identity = 98/149 (65.77%), Postives = 105/149 (70.47%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K + H+ VLVGG++ I KV+QLLQD FNGKEL KSINPDE           ILS EG  KV D             ETAGGVMT LIPRNTTIP KK Q FSTYSDNQ GVL+QVYEGER  TRDNNLLGKFEL+ IPPAPRGVPQI V
Sbjct:  327 KKTIHEIVLVGGSTRIPKVQQLLQDHFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADILLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKNQTFSTYSDNQTGVLVQVYEGERAMTRDNNLLGKFELTNIPPAPRGVPQIEV 475          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 1.235e-46
Identity = 96/145 (66.21%), Postives = 108/145 (74.48%), Query Frame = 1
Query:   43 HDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            HD VLVGG++ I KV++LLQD FNGKEL KSINPDE           IL G+ +++VQD             ETAGGVM+VLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  332 HDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEV 476          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.612e-46
Identity = 98/151 (64.90%), Postives = 107/151 (70.86%), Query Frame = 1
Query:   25 MRKMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            M K   HD VLVGG++ I KV++LL D F+GKEL KSINPDE           ILSG+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct:  327 MDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEV 477          
BLAST of FC931591 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.612e-46
Identity = 96/149 (64.43%), Postives = 108/149 (72.48%), Query Frame = 1
Query:   31 KMSSHDDVLVGGASMIRKVRQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 477
            K   HD VLVGG++ I KV++LLQDFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V
Sbjct:  328 KAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEV 476          
The following BLAST results are available for this feature:
BLAST of FC931591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71B_BOSMU7.238e-4764.43Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_PIG7.238e-4764.43Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HS71A_MOUSE7.238e-4764.24Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HS71A_BOVIN7.238e-4764.43Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP76_PIG9.453e-4764.43Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP70_XENLA9.453e-4765.10Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HS7C2_DICDI9.453e-4765.77Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP7D_DROME1.235e-4666.21Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP7A_CAEEL1.612e-4664.90Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP71_RAT1.612e-4664.43Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionC34106H01EF PostHarvP1 Citrus clementina cDNA clone C34106H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931591 ID=FC931591; Name=FC931591; organism=Citrus clementina; type=EST; length=478bp
ATTTAATTTTAAGATCTGTCCTAGATGCGAAAGATGTCATCCCATGATGA
TGTTCTTGTCGGTGGAGCTAGTATGATTCGGAAAGTCCGGCAACTTTTGC
AAGATTTCTTTAATGGGAAGGAGCTTTGCAAGAGCATCAACCCCGATGAG
GCTGTTGCCTATGGTGCTGCTGTGCGAGCTGCTATCTTGAGTGGTGAGGG
TAATGAGAAGGTGCAGGATCTTCTGCTATTGGATGTCGCACCTCTCTCCC
TTGGTTTGGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAAC
ACAACCATTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAA
CCAACCTGGTGTGTTGATCCAAGTCTATGAAGGCGAAAGGACAAGAACCA
GGGACAATAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCCCCAGCT
CCTAGGGGTGTTCCTCAAATCACTGTGT
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