FC931596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2C_BOVIN (Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN 244 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYN 73
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2A_XENLA (Myocyte-specific enhancer factor 2A homolog OS=Xenopus laevis GN=mef2a PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN 244 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYN 73
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2A_PONAB (Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN 244 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYN 73
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2A_MOUSE (Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN 244 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYN 73
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2A_CHICK (Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN 244 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYN 73
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 41/89 (46.07%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALE 289 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M + L +Y + Y P + + + LE Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQY-ASTDMDRVLLKYTE--YSEPHESRTNTDILE 86
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: MEF2B_MOUSE (Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 40/89 (44.94%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALE 289 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD ++ALIIF++ +L+++ +SS M + L +Y + Y P + + + L+ Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIFNSAQRLFQY-ASSDMDRVLLKYTE--YSEPHESRTNADILQ 86
BLAST of FC931596 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 49/162 (30.25%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 8 RKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN----------YGAPEPNVSAREAL-ELSSQQEYLKLKA------RYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQI 442 +K++ +GR ++ + +I+ + +RQVTF+KRR GL KKA EL LC AE+ +I+FS K + F S+ L+RY N G+P + L + S+ E K K R E+++RS N + + +N +L+ ++ L+ K + Sbjct: 57 KKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF-GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217 The following BLAST results are available for this feature:
BLAST of FC931596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931596 ID=FC931596; Name=FC931596; organism=Citrus clementina; type=EST; length=685bpback to top |