FC931600

Overview
NameFC931600
Unique NameFC931600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.832e-109
Identity = 191/225 (84.89%), Postives = 209/225 (92.89%), Query Frame = 2
Query:    2 VYGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ 676
            VYGEHWRKMRRIMTVPFFTNKVV+Q R  WE EAA VVEDVKK+P++AT GIVLR+RLQLMMYNNM+RIMFDRRFES+DDPLF RLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKIC++VK+RR+ LFK YFV+ERK++AS+K   +E LKCAIDHIL+A+ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ KLRNELDTVLGPG Q
Sbjct:  121 VYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNMFRIMFDRRFESEDDPLFLRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKDRRIALFKKYFVDERKQIASSKPTGSEGLKCAIDHILEAEQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQ 345          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.554e-108
Identity = 189/225 (84.00%), Postives = 206/225 (91.56%), Query Frame = 2
Query:    2 VYGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ 676
            VYGEHWRKMRRIMTVPFFTNKVV+Q R  WE EAA VV+DVKK+P+AAT G+V+R+RLQLMMYNNM+RIMFDRRFES+DDPLF +LK LNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVKE+R QLFKDYFV+ERKKL STKSM N  LKCAIDHILDA+ KGEINEDNVLYIVENINVAAIETTLWSIEW IAELVNHPEIQ KLR+EL + LGPG Q
Sbjct:  121 VYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNGERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKEKRFQLFKDYFVDERKKLGSTKSMDNNQLKCAIDHILDAKDKGEINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQ 345          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.430e-106
Identity = 187/226 (82.74%), Postives = 205/226 (90.71%), Query Frame = 2
Query:    2 VYGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKS-MSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ 676
            VYGEHWRKMRRIMTVPFFTNKVV+Q R+ WE EA  VV DVK + EA+  GIV+R+RLQLMMYN MYRIMFDRRFES++DPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  SN+ LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH +IQ K+R E+D VLGPGHQ
Sbjct:  121 VYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQ 346          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 378.252 bits (970), Expect = 2.274e-104
Identity = 187/225 (83.11%), Postives = 205/225 (91.11%), Query Frame = 2
Query:    2 VYGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ 676
            VYG    +MRRIMTVPFFTNKVV+Q RF WE EA  VV+DVKK+PEA ++GIVLRRRLQLMMYN MYRIMFDRRFES++DPLF +LKALNGERSRLAQSFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS +NE LKCAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH +IQ K+R E+D VLGPGHQ
Sbjct:  121 VYGT-LAEMRRIMTVPFFTNKVVQQYRFGWEFEAQSVVDDVKKNPEACSSGIVLRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKDRRLQLFKDYFVDERKKLGSTKSTTNEGLKCAIDHILDAQQKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQ 344          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 65/229 (28.38%), Postives = 115/229 (50.22%), Query Frame = 2
Query:    5 YGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATN---GIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNR---LKALNGERSRLAQSFEYNYGDFIPILR---PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            YG H+ K+R++ T+  F+ K +   R   EDE   +V+ V     +  N   GI+LR+ L ++ +NN+ R+ F +RF + +  +  +    KA+     +L  S      + IP LR   P   G        ++R  +       E RKK    K          +D +L  Q K +++ED ++ ++ ++  A ++TT  S+EW +AEL+ +P +Q+K++ ELD V+G
Sbjct:  116 YGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAM--AEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIMAEHTEARKKSGGAKQHF-------VDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIG 335          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 66/226 (29.20%), Postives = 117/226 (51.77%), Query Frame = 2
Query:    5 YGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKD---PEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD---DPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            YG H+ K+R++ T+  FT K +   R   EDE   +VE V +D   PE    G+ LR+ L  + +NN+ R+ F +RF + +   D      KA+     +L  S   +  + IP LR       K   E   RR +L +   + E   LA  KS   +  +  +D +L  + + +++ED ++ ++ ++  A ++TT  + EW +AE++ +P +Q+K++ E D V+G
Sbjct:  115 YGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASL--SIAEHIPWLRWMFPADEKAFAEHGARRDRLTRA--IMEEHTLARQKSSGAK--QHFVDALLTLKDQYDLSEDTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVG 334          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 65/226 (28.76%), Postives = 115/226 (50.88%), Query Frame = 2
Query:    5 YGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNG---IVLRRRLQLMMYNNMYRIMFDRRFESQD---DPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            YG H+ K+R++  +  FT K +   R   EDE   +VE V +   A  N    +V+R  L ++ +NN+ R+ F +RF + +   D      K +     ++  S   +  +FI  LR       ++ K   ERR +L      E  K L  + +  +      +D +   + + +++ED V+ ++ ++  A ++TT+ S+EW +AELV +P +QKKL+ ELD V+G
Sbjct:  119 YGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASL--SVAEFIWYLRWLCPLNEELYKTHNERRDRLTMKIIEEHAKSLKESGAKQH-----FVDALFTLKQQYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVG 337          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 62/223 (27.80%), Postives = 117/223 (52.47%), Query Frame = 2
Query:    8 GEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIV-LRRRLQLMMYNNMYRIMFDRRFE-SQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            G +WR +RRI +   F  + +       + +   +++D++K  E  + G+V +RR LQ    NN+   +F RRF+ S ++    +L+ +  E  +L  +F  N+ D +P LRP   LR + +  + V   R+  F    +E+ ++    +   ++     +D +L  Q + +++E++++ ++  +     +TT    EW +AELV HPE QKK + ELD V+G
Sbjct:  167 GGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQK--EYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGFQLLGAF--NWADHLPWLRPLDPLRIHARCARLVP--RVTTFVSNIIEQHRREEQRRESGDQC--DFVDVLLSLQGEDKLDEEDMIAVLWEMIFRGTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVG 381          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 64/227 (28.19%), Postives = 110/227 (48.46%), Query Frame = 2
Query:    5 YGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKA--LNGERSRLAQ-SFEYNYGDFIPILRPFL--RGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQ-TKGEINEDNVLY-IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            YGEHWR +RRI  +   +N  +        DE  R++  +  D       + L  RL  M +NN+ R++  +R+  +D    +  +A       S L Q S   N  DF+P+LR FL      K  K++  +     +    E R K     +M        IDH+L+ Q ++ E   D ++  +   + +A  +++  ++EW ++ L+NHPE+ KK+++ELDT +G
Sbjct:  120 YGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLR-FLDFENLEKRLKDISGKTDAFLRGLIEEHRTKKERANTM--------IDHLLNLQDSQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVG 337          
BLAST of FC931600 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 58/230 (25.22%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    5 YGEHWRKMRRIMTVPFFTNKVVRQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNR-LKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDA--------QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG 664
            YG+HWRKMR+I  +   T+K +   +   ++E + ++  + ++ E+    + + + +   + N ++RI+  ++F   D     +    L  E S    S   N GDFIP L    L+G  +  K+    R   F +  ++E    AST         C +  I+D          T  ++  + +  I   +  A +ET+   +EW ++EL+ HP   KKL+ E+++V+G
Sbjct:  130 YGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSL--NIGDFIPYLDCLDLQGIKRALKKA-NARFDAFAEKMIDEHIN-ASTIRNGEADAGCHVKDIIDVLLEMAKNDNTGAKVTREIIKAITYELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVG 355          
The following BLAST results are available for this feature:
BLAST of FC931600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
TCMO_ARATH6.832e-10984.89Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_ZINEL7.554e-10884.00Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_MEDSA2.430e-10682.74Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_CICAR2.274e-10483.11Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
C98A2_SOYBN1.909e-1828.38Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH3.256e-1829.20Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI3.256e-1828.76Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C78A4_PINRA1.047e-1627.80Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C81E1_GLYEC7.505e-1528.19Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C75A1_PINTA9.802e-1525.22Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]

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Properties
Property NameValue
Genbank descriptionC34106H11EF PostHarvP1 Citrus clementina cDNA clone C34106H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931600 ID=FC931600; Name=FC931600; organism=Citrus clementina; type=EST; length=707bp
AGTGTACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCTT
TCTTCACGAACAAAGTGGTTCGGCAGCAGCGGTTTAATTGGGAAGACGAG
GCCGCTAGAGTCGTTGAGGATGTTAAGAAGGACCCCGAGGCGGCGACCAA
TGGGATCGTCTTGAGGAGGCGGCTGCAGCTTATGATGTACAACAACATGT
ACAGGATTATGTTTGATAGAAGATTCGAGAGTCAGGATGATCCTTTGTTT
AACAGATTAAAGGCTTTGAATGGTGAGAGGAGTCGGTTGGCCCAGAGCTT
TGAGTACAATTACGGTGATTTTATTCCCATTTTGAGACCTTTCTTGAGAG
GCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACTCCAGCTCTTC
AAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCACGAAGAGCAT
GAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTGGACGCTCAGA
CAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGTTGAGAACATC
AATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGTGGGGAATTGC
AGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGCAATGAACTTG
ACACCGTGCTTGGTCCTGGTCATCAATCACTGAGCCTGACACCACNAACT
ACCCTAC
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