FC931601

Overview
NameFC931601
Unique NameFC931601
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:31..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931601 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 54/210 (25.71%), Postives = 92/210 (43.81%), Query Frame = 1
Query:   70 PVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQR--FKELVASRALEGIQTEVND-----MDWESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWID 672
            P I   +++   +  ++  I EA   WG F++ NHGI  + +  ++ + K  +    E++  +     ++ ++G  T++         W    + R  P S+IN    P     YR V                           G LK+   G +   +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID
Sbjct:   41 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWID 248          
BLAST of FC931601 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 51/223 (22.87%), Postives = 97/223 (43.50%), Query Frame = 1
Query:   37 LKKEFRDMENFPVISLENINGAE---RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWI 669
            L+++  D    P I L+NI   +   R   +E++ +A  +WG   L+NHGI  + M+ V++  +  +   +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y +                              L+K   G        K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL  +G+W+
Sbjct:   37 LEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWV 258          
BLAST of FC931601 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11
Identity = 51/224 (22.77%), Postives = 95/224 (42.41%), Query Frame = 1
Query:   34 LLKKEFRDMENFPVISLENINGAE---RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQR--FKELVASRALEGIQTEV-----NDMDWESTFYVRHLPQ--STINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWI 669
            L +++  +    P I LE ++  +   R    E++ +A  +WG   L+NHGI  E +D V+   K  +   +E++  +    A+  ++G  +++       ++WE  F+    P+  + ++  P    +Y                              G L+K   GA       K++ YP CP+P+L  G  AHTD   +  +   + V GLQL  + +W+
Sbjct:   42 LAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILH-NMVPGLQLFYEDKWV 264          
BLAST of FC931601 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 52/212 (24.53%), Postives = 91/212 (42.92%), Query Frame = 1
Query:   70 PVISLENINGAERAAILEK---INEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWI 669
            P I L+ I+  ++  I EK   + +A   WG   LVNHGI  E ++ V+   +  + + +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL  +GQW+
Sbjct:   53 PTIDLKEIDSEDKE-IREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGQWV 262          
BLAST of FC931601 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 51/216 (23.61%), Postives = 87/216 (40.28%), Query Frame = 1
Query:   70 PVISLENINGAE-------RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWI 669
            P I L++I   +       R    E++ +A   WG   LVNHGI  + ++ V+   +  +   ME++ K     AS  + G  +++       ++WE  F+    P+   +    P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL  +G+W+
Sbjct:   50 PTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWV 264          
The following BLAST results are available for this feature:
BLAST of FC931601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
FLS_CITUN1.743e-1325.71Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
LDOX_ARATH1.129e-1222.87Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR2.782e-1122.77Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY3.633e-1124.53Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI6.198e-1123.61Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionC34107A01EF PostHarvP1 Citrus clementina cDNA clone C34107A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931601 ID=FC931601; Name=FC931601; organism=Citrus clementina; type=EST; length=684bp
ATACACAAACACAAACACTCACAAACACACAGCTTGTTAAAGAAAGAATT
CAGAGATATGGAGAACTTCCCCGTTATCAGCTTGGAGAACATCAATGGTG
CTGAAAGAGCGGCTATCTTGGAGAAGATCAACGAGGCCTGTGAGAACTGG
GGCTTCTTTGAGCTGGTGAATCATGGAATTGAGCCGGAGTTTATGGACAC
AGTGGAGAGATTGACCAAGGCGCATTACAGAAAATGTATGGAGCAAAGAT
TCAAGGAGCTTGTTGCAAGCAGGGCACTTGAAGGTATCCAAACCGAGGTC
AATGACATGGACTGGGAAAGCACTTTCTATGTGCGTCACCTCCCTCAGTC
GACCATCAATGAAGTCCCAGATCTTGATGAGGAATACAGGAAGGTGATGA
AGGAATTTGCATTGAAATTGGAGAAATTAGCAGAGGAGCTATTGGACTTG
TTATGCGAGAATCTTGGATTAGAGAAGGGGTACTTGAAAAAGGTCTTTCA
TGGGGCAAACGGACCAACCTTTGGTACCAAAGTTAGCAACTACCCACCAT
GCCCCAAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGC
GGCATCATCTTGCTCTTCCAGGATGACAAAGTCAGTGGCCTTCAGCTTCT
TAAAGATGGCCAGTGGATTGATGTGCCCCCATTG
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