FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25
Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENKE-DYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            L K+ L+L +++A++ +  Y  F+  F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DYV RMKEGQ  IY++T +S  A +NSP LE   KKG EVL + D IDE+ VG L EF+GK L S T
Sbjct:  353 LTKRALQLLEKLAKDDQAKYQTFWNEFGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQKAIYFLTADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWVVGHLTEFDGKPLQSIT 485          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPF (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf0-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 58/130 (44.62%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 387
            L K+ L++ +++A+N+ E Y  F+++F + +K G  ED  NK K+A LLR+ ST    G+++  L +Y+ R KEGQ+ IYY+TGE+   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V
Sbjct:  358 LTKRVLDMLEKLAKNEPEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTNGTDGEQIVGLAEYLARAKEGQDKIYYLTGETYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSEFDGKTFV 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K L K+ L++ +++A ++ E Y KF++ F   LK G  ED  NK  +A+LLR+ ST +   ++  SL+DY+ RMKEGQ  IYYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK+L S T
Sbjct:  353 KALTKRSLQMLEKLAKDDAEKYLKFWKEFGLVLKEGPAEDFANKETIAKLLRFASTHNDGSEQTVSLEDYILRMKEGQKAIYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKQLQSIT 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K L K+ L++ +++A ++ E Y +F++ F   LK G  ED  NK  +A+LLR+ ST   S ++  SL+DYV+RMKEGQ  IYYIT +S  A  NSP LE   KKG EVL + D IDE+ +  L EF+GK L S T
Sbjct:  353 KALTKRSLQMLEKLAKDDAEKYQQFWKEFGLVLKEGPAEDFANKEAIAKLLRFASTHNDSSEQNVSLEDYVSRMKEGQKAIYYITADSYVAARNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSIT 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            + LVKK L   +E+  N+ E Y  F+  F   +K G+ +D+ N+  L E+L   ST    E T L DYVTRMK+GQ DIYY TGE++  +ENSP +E  + KG+EVL + D +DE  V ++ E+EGK L S
Sbjct:  356 RRLVKKILATVKELKANQPEKYRTFWTEFGAVVKEGLIDDTENRDSLLEILSVASTHDPAEPTDLADYVTRMKDGQTDIYYATGENRSTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYEGKTLRS 486          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 69/205 (33.66%), Postives = 98/205 (47.80%), Query Frame = 1
Query:    1 KNLVKKCLELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            + L KK L   +E+ +E  +DY  F+  F + +K G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S A                              +KD L                P CL+T  +G T  + R+ +A
Sbjct:  366 RRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKEGLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA 570          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 69/205 (33.66%), Postives = 98/205 (47.80%), Query Frame = 1
Query:    1 KNLVKKCLELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            + L KK L   +E+ +E  +DY  F+  F + +K G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S A                              +KD L                P CL+T  +G T  + R+ +A
Sbjct:  366 RRLTKKVLSTIKELQSERPDDYRTFWTQFGRVVKEGLLSDFDNQETLLQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA 570          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 1
Query:    7 LVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            + K+ L + +++A ++ E Y +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQN IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            V  IK  LG               P C+VTGE   ++ M ++M+A
Sbjct:  361 ITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQNKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQA 566          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_PHOLL (Chaperone protein htpG OS=Photorhabdus luminescens subsp. laumondii GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = 1
Query:    7 LVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            L K+ L++  ++A ++ E Y +F++ F   +K G  EDSTNK  +A+LLR+ ST   S  +  SL++YV+RM EGQ+ IYYIT +S  A +NSP LE  +KKG EVL + + IDE+ +G L +F+GKK  S +
Sbjct:  355 LTKRALQMLDKLAKDDAEKYQQFWQQFGLVMKEGPAEDSTNKEAIAKLLRFASTHNDSSAQTVSLEEYVSRMTEGQDKIYYITADSYAAAKNSPHLELFRKKGIEVLLLSERIDEWMMGYLTDFDGKKFQSVS 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 74/204 (36.27%), Postives = 101/204 (49.51%), Query Frame = 1
Query:   10 VKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            VK+ L L +E+AE + E Y  F+  F + LK G  ED +N+ ++A LLR+ ST +  +    SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S                              V  IK+ LG               P C+V GE      M++++K
Sbjct:  354 VKRILGLLEEMAEKEPEKYQTFWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK 557          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_ACTP25.925e-2546.62Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_PSEPF7.738e-2544.62Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_HAEI87.738e-2546.67Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_AGGAC7.738e-2547.41Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_SALTO1.011e-2445.04Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_MYCPA1.011e-2433.66Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA11.011e-2433.66Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_SHESR1.320e-2435.44Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_PHOLL1.320e-2445.11Chaperone protein htpG OS=Photorhabdus luminescens... [more]
HTPG_ACIF51.320e-2436.27Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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