FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.752e-22
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            + K+ L + +++A+++ E Y  F+  F + LK G  ED  NK ++A LLR+ ST      T  SL+ Y+ RMK GQ+ IYYI  +S +A  NSP LE L+KKG EVL + + IDE+ V  L EF+ KKL S T
Sbjct:  361 ITKRVLGMLEKLAKDEPEQYQSFWAEFGQVLKEGPAEDFANKERIAGLLRFASTHDNSAATTVSLEAYIERMKAGQDKIYYIVADSHEAAANSPHLELLRKKGIEVLLLSERIDEWLVNHLTEFKDKKLHSVT 493          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.752e-22
Identity = 54/133 (40.60%), Postives = 88/133 (66.17%), Query Frame = 1
Query:   13 KKCLELFQEIAENKED-----YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            K+ L + + +A+++++     Y  F+E F + LK G+ ED  N  ++A+LLR+ +T   + ++  SL DYV RMKEGQ+ IYY+T ++  A ++SP LE  +KKG EV+ + D +DE+ +  L EF+GK+LVS
Sbjct:  359 KRVLSMLEAMADSEDEAERAKYKTFWEQFGQVLKEGVGEDHGNGERIAKLLRFATTHGDTAEQSVSLVDYVGRMKEGQDKIYYVTADTWVAAKSSPHLEVFRKKGIEVVLLTDRVDEWLLSYLHEFDGKQLVS 491          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            + LVKK L   +++  N+ E Y  F+  F   +K G+ +D+ N+  L E+L   ST    E T L  YV RMK+GQ++IYY TGE++  +ENSP +E  + KG+EVL + D +DE  V ++ E++GK L S
Sbjct:  356 RRLVKKVLATVKDLKANQPEKYRTFWTEFGAVVKEGLIDDTENRDSLLEILSVASTHDPAEPTDLTGYVNRMKDGQSEIYYATGENRTTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYDGKTLRS 486          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22
Identity = 52/121 (42.98%), Postives = 81/121 (66.94%), Query Frame = 1
Query:   10 VKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 372
            VKK L   + +++++++Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++
Sbjct:  358 VKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYD 477          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22
Identity = 56/133 (42.11%), Postives = 86/133 (64.66%), Query Frame = 1
Query:    7 LVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            L K+ L++  ++A ++ E Y  F++ F   LK G  ED +N+  +A+LLR+ +T+S    +  SL+DYV+RM EGQ+ IYYIT +S  A ++SP LE  +KKG EVL + + IDE+ +  L EF+GK   S +
Sbjct:  355 LTKRVLQMLDKLAKDDAEKYQTFWQQFGLVLKEGPAEDGSNREAIAKLLRFATTQSDSSAQTVSLEDYVSRMVEGQDKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSERIDEWMMSYLTEFDGKSFQSVS 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 1
Query:    4 NLVKKCL-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            ++ KK L EL ++  ++ EDY  F+++F   LK G+ ED   + ++ E+ R+ STKSGD +TSL DY++R KEGQ+ IYYI G+  + +  SP LE  + K  EVL + D +DE+ +  + EFEGK   S T
Sbjct:  340 SVTKKVLSELKKKAKKSPEDYAGFWQNFGPVLKEGLIEDPALRDRILEICRFSSTKSGD-VTSLADYISRCKEGQDAIYYIAGDDARKIAQSPHLEGFRAKDVEVLLLSDHVDEFWLQHITEFEGKPFKSIT 470          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22
Identity = 52/121 (42.98%), Postives = 81/121 (66.94%), Query Frame = 1
Query:   10 VKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 372
            VKK L   + +++++++Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++
Sbjct:  358 VKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYRENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYD 477          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 57/133 (42.86%), Postives = 87/133 (65.41%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-----KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST-KSGDELT-SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            K+ L + + +A++     K+ Y  F++ F + LK G+ ED  NK ++A+LLR+ ST  +GDE T SL DY+ RMK+GQ+ IYY++ E+  A ++ P LE  +KKG EVL + D +DE+ +  L +FE K LVS
Sbjct:  359 KRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQDKIYYVSAENWTAAKSGPHLEVFRKKGVEVLLLTDRVDEWMLSFLHDFEEKALVS 491          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SACD2 (Chaperone protein htpG OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 65/206 (31.55%), Postives = 103/206 (50.00%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            L K+ L++ +++A+ + E Y  F++ F + LK G  ED  NK K+A+LLR+ +T   + ++  SL  Y+ RMKEGQ+ IYY+  E+    +NSP LE  +KKG EVL + + ID++ +G L E++GK+   V                              + +K  L                P CLV GE+   A M R+++A
Sbjct:  359 LTKRVLDMLEKMAKKEPEKYATFWKEFGEVLKEGPAEDFANKEKIAKLLRFATTHKNTNEQDQSLDAYIERMKEGQDKIYYVVAENFNTAKNSPHLEVFRKKGIEVLLLSNRIDDWLMGHLMEYDGKQFQDVGKGSLDLGKLDSEEDKKEQEKVEEAMAPFVERMKAALAEQVEEVRITHRLTESPACLVVGEHDMGAQMRRLLEA 564          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 56/137 (40.88%), Postives = 85/137 (62.04%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAEN-----KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            + + K+ L + +++A +     KE Y  F++ F + LK GI ED  N+ ++A+LLR+ ST +   ++  SL DYV RMK  Q  IYY+T ++ +A  +SP LE  +KKG EVL + D +DE+ +  L EFEGK L S
Sbjct:  353 EGVTKRVLSMLEDLANSDNEADKEKYAGFWKEFGQVLKEGIGEDFANRERIAKLLRFASTHTDTPEQTVSLADYVARMKPEQTKIYYVTADTWQAATHSPHLEVFRKKGVEVLLLTDRVDEWILSFLTEFEGKPLQS 489          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_SHEFN2.752e-2244.36Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_RALME2.752e-2240.60Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_SALAI3.594e-2241.22Chaperone protein htpG OS=Salinispora arenicola (s... [more]
HTPG_HELPY4.694e-2242.98Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_ERWCT4.694e-2242.11Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_ROSDO6.131e-2242.42Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_HELPH6.131e-2242.98Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_RALSO8.007e-2242.86Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_SACD21.046e-2131.55Chaperone protein htpG OS=Saccharophagus degradans... [more]
HTPG_BURXL1.046e-2140.88Chaperone protein htpG OS=Burkholderia xenovorans ... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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