FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 1
Query:    1 KNLVKKCL-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEF 369
            + L K+ L +L +  A++ E Y  F+    K  KLG + D  N+ K A LLR++S+   D   LTSL DY++R +EGQ +I+YI    ++A    P +E  ++KG EVLY+++ IDE+ +  L  +
Sbjct:  344 QTLTKQVLADLARLAADDAEAYATFWRQHGKVFKLG-YSDYANREKFAPLLRFNSSHHDDAQGLTSLDDYISRAREGQKEIWYIAAPGREAARLDPRVEVFRRKGLEVLYLLEPIDEFVLETLDSY 468          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1
Query:   10 VKKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            VKK L   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K ++
Sbjct:  349 VKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFIA 474          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 58/210 (27.62%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  E+ E+YNKF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KE QN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  341 KNAITKRVLGELRKKKEESSEEYNKFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEEQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEDKNTHSKKSDDEYKLLTDYFKETLGKLVKEVKISKKLTSSPACLAVSDSAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15
Identity = 58/210 (27.62%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  ++ ++YN F+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K +    K+VLG               P CL   E      MER +  Q
Sbjct:  341 KNAITKRVLGELKKKKEDSPDEYNNFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHTIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15
Identity = 58/210 (27.62%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  ++ ++YN F+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K +    K+VLG               P CL   E      MER +  Q
Sbjct:  341 KNAITKRVLGELKKKKEDSPDEYNNFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 1
Query:    7 LVKKCLELFQE------IAENKED---YNKFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            L++K  ++ Q+      I ++K+D   Y KF+E +   ++ GI   +    K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  412 LIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKQTEVLFCYEQFDELTLLHLREFDKKKLIS 551          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 43/118 (36.44%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   46 ENKEDYNKFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            ++ E Y +F+E +   ++ GI   +  + K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  431 KDAEKYARFFEDYGLFVREGIVTTAEQEVKEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKRKNTEVLFCYEQFDELTLLHLREFDKKKLIS 548          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K++  + L   +++AE + + Y K +E+F    K GI++ +  +  +  L R+ +T     L SLKDYV  +K+ Q  IYY+ G+    +E SP LE  + +G EVL + D +D + V     FEGK   S T
Sbjct:  357 KSITGRVLSELEKLAEKDAQAYGKVWEAFGPMFKEGIYDAADRRDAILSLCRFRTTAGS--LRSLKDYVGALKDNQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSAPSFEGKPFKSVT 487          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: TRAP1_MOUSE (Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 1
Query:    7 LVKKCLELFQE------IAENKED---YNKFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            L++K  ++ Q+      I ++K+D   Y KF+E +   ++ GI   +    K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  412 LIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLIS 551          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 1
Query:   43 AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVL 498
            A   E+Y +F++S + N      ED         L   H +  G +L  LKD    MK  Q  IYYITGE+K  V NS F+E L+K G EV+YM++ ID+Y V QLKE E K +VS                            CK++KD+L
Sbjct:  127 AITNEEYGEFHQSLTNNW-----ED--------HLAVKHFSVEG-QLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML 264          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_DESVH1.120e-1537.30Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
HTPG_CAMJR1.120e-1539.06Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_RICAH1.463e-1527.62Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_RICBR1.910e-1527.62Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB81.910e-1527.62Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
TRAP1_RAT2.495e-1535.00Heat shock protein 75 kDa, mitochondrial OS=Rattus... [more]
TRAP1_BOVIN2.495e-1536.44Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_NITHX2.495e-1533.83Chaperone protein htpG OS=Nitrobacter hamburgensis... [more]
TRAP1_MOUSE3.259e-1535.00Heat shock protein 75 kDa, mitochondrial OS=Mus mu... [more]
HS905_HUMAN3.259e-1536.18Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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