FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 57/207 (27.54%), Postives = 90/207 (43.48%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-----ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM 603
            K +  K +   + +A+ K ED+ + +E+F   LK G++ED   + KL  L R+  T +  E  +L  YV  MKE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S                                   VIKD LG                 CLV G +G    +E+++
Sbjct:  348 KAVTGKVIGELESLADKKPEDFARIWEAFGPVLKEGLYEDYERREKLLALARF--TTTAGEKRTLSQYVEAMKENQTEIYYLVGDSIERLKSNPKLESATARGIEVLLLTDGVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLDADKPDDKPDETKADEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGFGPDRELEKML 552          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 57/210 (27.14%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  341 KNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 57/210 (27.14%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  341 KNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 57/210 (27.14%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  E+ E+YNKF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  341 KNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSTKSNDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K++  + L   +++A+ + + Y K +E+F    K GI++ +  +  +  L R+ +T     L SLKDYV  +KE Q  IYY+ G+    +E SP LE  + +G EVL + D +D + V     FEGK   S T
Sbjct:  352 KSITGRILSELEKLADKDAQAYGKIWEAFGPMFKEGIYDAADRRDTVLGLSRFRTTAGS--LRSLKDYVGALKENQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSGPSFEGKPFKSVT 482          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_METS4 (Chaperone protein htpG OS=Methylobacterium sp. (strain 4-46) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   43 AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            A++ E Y  F+++F   LK GI ED+ ++  +A LLR+ ST + +  TS  DYV+RMK  Q  IY + G+   A+  S  +E  + +G EVL + D +D +   +L +F+GK + S T
Sbjct:  354 AKDAESYATFWQAFGPVLKEGIWEDAEHRDDIAALLRFRST-AVEGWTSFADYVSRMKPNQEAIYILVGDDAAALARSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSIT 470          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 56/210 (26.67%), Postives = 95/210 (45.24%), Query Frame = 1
Query:    1 KNLVKKCL--ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            KN + K +  EL ++  E+ E+YNKF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q
Sbjct:  343 KNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 551          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = 1
Query:   16 KCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K L   +  A++ + Y  F+++F   LK GI ED+  +  +A L+R+ S+ + +  TS  DYV+RMK  Q  IY + G+  KA+ +S  +E  + +G EVL + D +D +   +L +F+GK + S T
Sbjct:  345 KVLSELKSRAKDADGYASFWQAFGPVLKEGIWEDAEQRDDIAGLIRFRSS-AVEGWTSFADYVSRMKPNQEAIYILVGDDTKALASSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSIT 470          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVS 390
            +N VKK L   +++   K +   F E +++ +K GI+ D TNK  L  ++RY S+ S + + SL DY++R    + +IYYI G  +K + NSP LE  KK   EVL M    VD+I    +G  KE+  K + +
Sbjct:  353 QNSVKKILGAIKKLDSEKMEI--FTEQYNRVIKEGIYTDHTNKETLLGIVRYKSS-SEEGMVSLDDYISRGDSEKKEIYYIVGADEKVLRNSPLLEAYKKANIEVLIMDDEEVDSIVAPMIGSYKEWTFKDITT 483          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   25 ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAV 351
            +L +   +++  Y  F+E+F   LK GI+ED   K  L  L R+ +T S D   SL+  + RMKEGQ+ +YYITG+   A+  SP +E    +G EVL + D IDE+ V
Sbjct:  352 DLAKRARDDESAYLTFWENFGAVLKEGIYEDFERKEDLVALARFRTTAS-DTPVSLETVIGRMKEGQSALYYITGDDATALARSPQVEGFVARGVEVLLLTDPIDEFWV 459          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_RHOPS4.256e-1527.54Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RICRS5.558e-1527.14Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO5.558e-1527.14Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICCN5.558e-1527.14Chaperone protein htpG OS=Rickettsia conorii GN=ht... [more]
HTPG_NITWN1.238e-1433.83Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]
HTPG_METS41.617e-1437.29Chaperone protein htpG OS=Methylobacterium sp. (st... [more]
HTPG_RICM52.112e-1426.67Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_METNO2.112e-1434.65Chaperone protein htpG OS=Methylobacterium nodulan... [more]
HTPG_SULNB2.758e-1436.57Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
HTPG_RHORT2.758e-1440.37Chaperone protein htpG OS=Rhodospirillum rubrum (s... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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