FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_CAMHC (Chaperone protein htpG OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 1
Query:   10 VKKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 372
            VKK L   ++I  + KE Y KFY+ F K LK G+   ST K ++ +L  + S+K+G EL  L +Y   M   Q +IYYI+G   + ++NSP LE+   K  EVL   D ID   +  + EF+
Sbjct:  352 VKKILGELEKIKNSDKEKYAKFYKLFGKVLKEGLWGFSTEKDEILKLCLFKSSKTG-ELIDLAEYKKSMAAEQKEIYYISGGKAETLKNSPLLEEFNAKNIEVLICDDEIDTIIMPMIGEFD 472          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_AZOC5 (Chaperone protein htpG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS----LKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            K +  + L   +++A++  E Y   + +F   LK G++ED   + +L  L R+ +T SG    +    LKDYV  +KE Q  IYYITG+  + VE++P LE  + +G EVL + D +D + V    ++EGK   S T
Sbjct:  350 KGVTGRVLTELEKLAQSDAEAYAGIWSNFGAVLKEGLYEDYERRAQLLNLARFKTTTSGTAADTGWRTLKDYVADLKENQTAIYYITGDLAR-VEHAPQLEGFRARGVEVLLLPDQVDSFWVTAGVDYEGKPFKSVT 485          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1
Query:   10 VKKCLELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG---DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY---AVGQLKEFE 372
            VKK L  F+ +AE + + Y++F   +++ LK G++ D  ++ +L EL+R+ +       D  TS  +YV+RMK  Q  IYYI G   + +  SP  E  + +G+EVL M D ID     +V + KE+E
Sbjct:  365 VKKLLGEFKRLAECDGKKYDEFITQYNRPLKEGLYSDYEHREQLLELVRFRTLSESVPEDGWTSFAEYVSRMKPDQKAIYYIAGNDDRVLRQSPHAESYRLQGFEVLVMSDDIDGIVMPSVSKYKEWE 492          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP5 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisA53) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 54/192 (28.12%), Postives = 87/192 (45.31%), Query Frame = 1
Query:   46 ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV---IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            ++ E++ K +++F   +K GI ED   + KL  L R+ +TK GD  T LK+YV  +++ Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S +                            V   IKD LG                 CL+ G  G    +ER++  Q
Sbjct:  364 KDPENFAKIWDAFGPVIKEGIWEDYERREKLLALSRFTTTK-GDNRT-LKNYVEDLRDNQTEIYYLVGDSLERLKSNPKLESAAARGIEVLLLTDPVDAFWTSAPLDFGGKPLKSLSQGDVNFDLIPTTDEAKDEQPKPETDEALVIATIKDALGERVSDVRASQRLTASASCLIAGGQGPDRALERMLAQQ 553          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13
Identity = 53/188 (28.19%), Postives = 79/188 (42.02%), Query Frame = 1
Query:   55 EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-----ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM 603
            E + K +++F   +K G++ED   + KL  L R+  T +  E  SL  YV  MKE Q +IYY+ G+S   ++ +P LE    +G EVL + DA+D +      +F GK L S                                   VIKD LG                 CLV G +G    +E+++
Sbjct:  367 EQFAKIWDAFGPVIKEGLYEDYERREKLLSLARF--TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGEVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKML 552          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPB (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB18) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 54/192 (28.12%), Postives = 83/192 (43.23%), Query Frame = 1
Query:   46 ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXC---KVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 612
            ++ E + K +++F   +K GI ED   + KL  L R+ +TK   E  +LK YV  +KE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S +                                IKD LG                 CLV G  G    +ER++  Q
Sbjct:  364 KDPEAFGKIWDAFGLVIKEGIWEDYERRDKLLALSRFTTTKG--ENRTLKQYVEDLKENQTEIYYLVGDSIERLKSNPKLESAAARGIEVLLLTDPVDAFWTSAPLDFGGKPLKSLSQGDVDFGQIPTTEENKDEQAKPETDEALTIAAIKDALGDKVSDVRASQRLTASASCLVAGGLGPDRALERMLAQQ 553          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13
Identity = 42/135 (31.11%), Postives = 78/135 (57.78%), Query Frame = 1
Query:    4 NLVKKCLELFQEIAENKE-DYNKFYESFSKNLKLGIHE--DSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 396
            ++ ++ L   +E A++    Y  F+E+F   LK G+ E  D+ ++  +  + R++S+ S + EL SL DY++RMK GQ  I+Y++G   ++   SP +E +   G EV+ +VD +D++    + E++G    S T
Sbjct:  343 SVTRRVLTSLREKADSDPVSYKTFWENFGPVLKEGLCEAMDTESRESILSVCRFYSSNSKEGELISLGDYISRMKPGQEHIFYLSGNDLESAMRSPQIEGMVSNGIEVVLLVDPVDDFWTSVVLEYKGVPFKSVT 477          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_BRAJA (Chaperone protein htpG OS=Bradyrhizobium japonicum GN=htpG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   46 ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            ++ E++ K +++F   LK GI+ED   + KL  L R+ +T    E  SLK  V   K  Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      EFEGK L S
Sbjct:  364 KDAENFAKIWDAFGAVLKEGIYEDFERREKLLALSRFTTTTG--EKRSLKQVVADFKPNQTEIYYLVGDSIERLKSNPRLEAATARGIEVLLLSDPVDAFWTSMPTEFEGKPLKS 476          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = 1
Query:    7 LVKKCLE-LFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHS----TKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            LVK+ L+ L  E   + E +N F   F    K GI  D   K ++++LLR+ S    T S  +  SL+ YV+RMK  Q +IY+++  ++    +SP+ E  + K  EV+++ +A+DE+ +  +  F  KK+VS
Sbjct:  433 LVKRILKHLNDEAKSDPEKFNVFMTEFGGFFKEGIITDFKWKDEISKLLRFESSNGSTASKTDAVSLEQYVSRMKPEQKNIYFLSVPNRAVGLSSPYYEPFQLKDIEVIFLYNAVDEFVLTNVGHFGDKKIVS 565          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_SULDN (Chaperone protein htpG OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 41/128 (32.03%), Postives = 74/128 (57.81%), Query Frame = 1
Query:   10 VKKCL-ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGE-SKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 387
            VKK L EL +    + + Y+ F+  F   LK G++ D  N+  + ELL++++  S DE   +++++  + E + +IYYITG+ S   +++SP LE+ K +G  VL + + ID      + E++  KL+
Sbjct:  360 VKKVLSELAKMAKRDAKKYDDFFTQFGNVLKEGLYSDYGNRENILELLKFNTINS-DEKIMIEEFIKNVDETKKEIYYITGKTSLSMLKSSPALERFKSRGINVLVLNEEIDTIIFPMVTEYKEYKLI 486          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_CAMHC3.603e-1439.34Chaperone protein htpG OS=Campylobacter hominis (s... [more]
HTPG_AZOC54.705e-1435.04Chaperone protein htpG OS=Azorhizobium caulinodans... [more]
HTPG_TREPA8.026e-1435.94Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_RHOP51.048e-1328.13Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOP21.369e-1328.19Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOPB1.788e-1328.13Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_ANAMM3.050e-1331.11Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_BRAJA3.983e-1336.52Chaperone protein htpG OS=Bradyrhizobium japonicum... [more]
TRAP1_DICDI8.874e-1333.83TNF receptor-associated protein 1 homolog, mitocho... [more]
HTPG_SULDN5.752e-1232.03Chaperone protein htpG OS=Sulfurimonas denitrifica... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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