FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931602_ssr431 microsatellite FC931602_ssr431:431..442. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:773..1468. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.650e-59
Identity = 124/232 (53.45%), Postives = 155/232 (66.81%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTAWLVTCPARRPWR-SIGEPIMEE 693
            KN+VKK LELF EIAE+KE ++KFY +FSKN+KLGIHEDS N+  LA+LLR++STKSGDE TSL DYVTRM E Q ++YYITGES KAV  SPFL+ LK+KG+EVL++VD IDEYA+ QLKEFEGKKLV  T                           K +K+VLG               PC + TG++GW+ANMERIMKAQALRDT+      +++ +  S   PI++E
Sbjct:  386 KNIVKKALELFTEIAEDKEQFDKFYTAFSKNIKLGIHEDSQNRNTLAKLLRFNSTKSGDEQTSLSDYVTRMPEHQKNMYYITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDIT-KDFELEETEEEKKQREAEEKEYDGLAKALKNVLGDKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKE 616          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.650e-59
Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KN+VKK LELF+E+A NKEDY KFYE FSKN+KLGIHEDSTN+ KL ELLR+HS++SG+E+T+LKDYVTRMKEGQ  IYY+TG+SKK +E SPF+E+ +++G EVL+M D IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD++
Sbjct:  389 KNIVKKALELFEELAGNKEDYKKFYEQFSKNVKLGIHEDSTNRKKLMELLRFHSSESGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETEEEKKQREEEKASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSS 598          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.825e-58
Identity = 115/219 (52.51%), Postives = 147/219 (67.12%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTAWLVTCPARR 657
            KNLV++CL++F EIAE+KE++  FY++FSKNLKLGIHED+ N+  LA+LLRY+S  S D+L SL+DY+T+M E Q +IY+ITGESK+AVENSPFLE  + K ++VL+MVD IDEYAV QLKEFEGKKLV+ T                           K +K +LG               PC L TG+YGW+ANMERIMKAQALRDT+      +R+
Sbjct:  389 KNLVRRCLDMFNEIAEDKENFKTFYDAFSKNLKLGIHEDAANRPALAKLLRYNSLNSPDDLISLEDYITKMPEHQKNIYFITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRK 607          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 6.934e-58
Identity = 107/210 (50.95%), Postives = 140/210 (66.67%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KNLVKK +EL +E+ E+KE+Y KFYE FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMKE Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS T                          CK++K +L                PCC+VT ++GW+ANMERIMKAQALRDTA
Sbjct:  399 KNLVKKTMELIEELTEDKENYKKFYEQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFEGLCKLMKSILDSKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTA 608          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 222.631 bits (566), Expect = 1.545e-57
Identity = 117/210 (55.71%), Postives = 141/210 (67.14%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KN+VKK LELF EIAE++E ++KFY +FSKN+KLGIHED+ N+  LA+LLRY STKSGDE TSL DYVTRM E Q  IYYITGES KAV  SPFL+ LK+K +EVL++VD IDEYA  QLKEF+GKKLV  T                           K +K++LG               PC + TG++GW+ANMERIMKAQALRDT+
Sbjct:  391 KNIVKKTLELFNEIAEDREQFDKFYSAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQKQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDIT-KDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTS 599          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.545e-57
Identity = 106/210 (50.48%), Postives = 143/210 (68.10%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KN+VKKCLE+F+E+AENKEDY +FYE F KN+KLGIHED+ N+ KL ELLR++ST+SG+ +T+LKDYVTRMK  QN IYYITG+SKK +E+SPF+E+ K++G+EVL+M +  DEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME++M+ QALRD++
Sbjct:  386 KNIVKKCLEMFEEVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEVMTTLKDYVTRMKAEQNSIYYITGDSKKKLESSPFIEQAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKRQREEEKATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSS 595          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.635e-57
Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KN+VKKCLE+F E+AENKEDY +FYE F KN+KLGIHED+ N  KL E LR++ST+SG E+T+LKDYVTRMKEGQ  IYYITG+SKK +E+SPF+E+ +++G EVL+M + IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QA+RD++
Sbjct:  138 KNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIHEDTANPKKLMEFLRFYSTESGLEMTTLKDYVTRMKEGQKSIYYITGDSKKKLESSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKRCKTMKEVLGDKVEKVTVSDRLSTSPCILVTSEFGWSAHMEQIMRNQAVRDSS 347          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.441e-57
Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KN+VKKCLE+F E+AENKEDY +FYE F KN+KLGIH+D+ N+ KL E +R++S++SG+E+T+LKDYVTRMK GQ  IYYITG+SKK +E+SPF+E+ K++G EVL+M + IDEY + Q+K+FE KK    T                          CK +K+VLG               PC LVT E+GW+A+ME+IM+ QALRD++
Sbjct:  385 KNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIHQDTANRKKLMEFVRFYSSESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLESSPFIEQAKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSS 594          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.494e-57
Identity = 105/210 (50.00%), Postives = 140/210 (66.67%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KNLVKK +EL +E+ E+KE+Y KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMK+ Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS T                          CK++K +L                PCC+VT ++GW+ANMERIMKAQALRDTA
Sbjct:  399 KNLVKKTMELIEELTEDKENYKKFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLADYVSRMKDNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTA 608          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.001e-56
Identity = 105/210 (50.00%), Postives = 139/210 (66.19%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            KNLVKK +EL +E+ E+KE+Y KFY+ FSKNLKLG+HEDS N+ KLA+ LR+H++ SGD+  SL DYV+RMKE Q  +Y+ITGESK  V NS F+E++K +G+EV+YM + IDEY +  LKE++GK+LVS T                          CK++  +L                PCC+VT ++GW+ANMERIMKAQALRDTA
Sbjct:  398 KNLVKKTMELIEELTEDKENYKKFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKAKFESLCKLMNAILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTA 607          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HSP90_PODAN1.650e-5953.45Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_TRYBB1.650e-5953.33Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_SCHPO1.825e-5852.51Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_DROPS6.934e-5850.95Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP90_ASPFU1.545e-5755.71Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP83_LEIAM1.545e-5750.48Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP83_LEIDO2.635e-5750.95Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP83_LEIIN3.441e-5750.00Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP83_DROME4.494e-5750.00Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV1.001e-5650.00Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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