FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931602_ssr431 microsatellite FC931602_ssr431:431..442. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:773..1468. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36
Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA
Sbjct:  462 KKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKENREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQA 666          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36
Identity = 80/206 (38.83%), Postives = 119/206 (57.77%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA++K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA
Sbjct:  462 KKLVRKTLDMIKKIADDKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQA 666          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36
Identity = 80/206 (38.83%), Postives = 119/206 (57.77%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA++K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA
Sbjct:  462 KKLVRKTLDMIKKIADDKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQA 666          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36
Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA
Sbjct:  462 KKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQA 666          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36
Identity = 86/231 (37.23%), Postives = 126/231 (54.55%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAE-------NKE--------------DYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            K L++K L++ +++AE       NKE               Y KF+  F K++KLGI ED+TN+ +LA+LLR+ S+KS  +L SL +Y++RMK GQ DI+Y+TG SK+ +E SPFLE+L KK YEV+Y  D +DEY +  L ++E KK  + +                           K + D  G               PC +VT +YGW++NME+IM+AQ L D +
Sbjct:  467 KKLIRKALDMIRKLAEEDPDEYSNKEKTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLDEYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKAL-DTEG--IDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDAS 694          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36
Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ NMERIMKAQA
Sbjct:  462 KKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDMTSLDQYVERMKEKQDKIYFMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQA 666          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K LV+K L++ ++IA+ K + + F++    N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  YV RMKE Q+ IY++ G S+K  E+SPF+E+L KKGYEV+Y+ + +DEY +  L EF+GK+  +                               +KD  L                PC LV  +YGW+ANMERIMKAQA
Sbjct:  382 KKLVRKTLDMIKKIADEKYNDDTFWKG--TNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSANMERIMKAQA 585          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35
Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 1
Query:   13 KKCLELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRD 624
            KK +E   E  E K  Y KF+  F K++KLGI ED+ N+ +LA+LLR+ +TKS  +LTSL  Y+ RMK+ Q DI+YITG SK+ +E SPFLE+L KKGYEV++  D +DEY +  L ++E KK  + +                               ++                 PC +VT ++GW+ANMERIM++Q L D
Sbjct:  495 KKDVEKSGENDEKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQKDIFYITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDKELKEAFKELTKWW---KGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSD 695          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34
Identity = 86/233 (36.91%), Postives = 121/233 (51.93%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA----------------------ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVL-GXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTA 630
            K L++K L++ ++IA                      E K  Y KF+  F K++KLGI ED+ N+ +LA+LLR+ STKS  +LTSL  Y++RMK GQ DI+YITG SK+ +E SPFLE+L KK YEV+   D +DEY +  L ++E KK  + +                           K  K  L                 PC +VT +YGW++NMERIM++Q L D +
Sbjct:  473 KKLIRKALDMIRKIADEDPDEANDKDKKEVEESTDNDEKKGQYAKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLTKKNYEVILFTDPVDEYLMQYLMDYEDKKFQNVS----KEGLKIGKDSKDKELKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDAS 701          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 82/203 (40.39%), Postives = 116/203 (57.14%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            K++VKK ++L +++A++K +DY  F+++F   LK G+  ++  K KL  LLRY S++  + LTSL DYV RMKEGQ  IYY+ GES+KAV +SP LE LK++G+EVLYM D +DE+A   L+EF+GK LVSA                              +KDVL                P CLV  E G  A +ER+++
Sbjct:  358 KHVVKKSVDLLEKLAKDKPDDYLTFWKAFGTVLKEGLATEAEQKDKLGGLLRYESSRE-EGLTSLADYVGRMKEGQEAIYYVYGESRKAVADSPHLEALKQRGFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVLQESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQ 559          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
ENPL_PIG3.349e-3638.83Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_MACFA3.349e-3638.83Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN3.349e-3638.83Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_CANFA3.349e-3638.83Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_HORVU4.373e-3637.23Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_BOVIN4.373e-3638.83Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_RABIT2.835e-3538.83Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
ENPL_ARATH8.248e-3539.22Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_CATRO1.077e-3436.91Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
HTPG_MYXXD2.246e-3240.39Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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