FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 85/208 (40.87%), Postives = 107/208 (51.44%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV---IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            KNLV K L    E  E   EDY KFY+ F   LK G+H D  NK KL EL+ + S+K+      SLK+YV RM E Q +IYYITG S+ A+ENSP LE  +KKG+EVLYM D +DE+ V  L +++GKKL +                              V   +K+ L                 CCLV  EYG  ANME+I+KA
Sbjct:  362 KNLVGKILSTLVETKEKTPEDYLKFYKEFGPVLKEGVHFDHANKEKLQELILFESSKTEAGNYISLKEYVARMPEAQKEIYYITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILKA 569          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31
Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  199 YVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDTAWLVTCPARRPWR-SIGEPIME 690
            YV+ MKE Q   YYITGESK+ V NS F+E+++K+G+EV+YM + IDEY V QLKEF+GK LVS T                          CK++K++L                PCC+VT  YGWTANME+IMKAQALRD + +    A++    +   PIME
Sbjct:  345 YVSHMKETQKSTYYITGESKEQVANSAFVERVRKQGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKEKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIME 509          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAEN--KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK-KLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQA 615
            K ++ K + + +E++E+  K  YN+F++ F  ++KLG  ED  NK +L + L + S+K  +ELT+   YV RMKEGQ+ IY+ITG+SK +VE SP +E+  KKGYEVL++VD IDEY V QL +F+ K K  +                               +K  L                P  LV+  +G TAN ERIMKAQA
Sbjct:  441 KVILVKFISMIKELSEDEDKTKYNEFFKKFGSSMKLGAIEDQANKKRLTKYLLFPSSK--EELTTFAGYVERMKEGQDQIYFITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTLSDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQA 646          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 83/205 (40.49%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   10 VKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            VKK L + +++AEN+ E Y +F++ F K +K G  ED  NK K+A LLR+ ST +  +  + SLKDYV RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+  G L EF+GK L S                              V  IK +LG               P CLVTGE   +AN+ER++KA
Sbjct:  358 VKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFDGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLLKA 562          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30
Identity = 79/205 (38.54%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   10 VKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            VK+ L + +++AENK E+Y KF++ F + LK G  ED  NK ++A LLR+ ST +   +++ S KDY+ RMKEGQ  IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EF+GKKL S                              V  I+  LG               P CLV GE+  + N+ER++KA
Sbjct:  357 VKRVLSMLEDLAENKPEEYAKFWKEFGRVLKEGPGEDFANKERIAGLLRFASTHADTDEQVVSFKDYIARMKEGQEAIYYITADSFAAAKHSPHLEIFRKKGIEVLLLSDRVDEWLVSSLTEFDGKKLQSVAKGDLDLGKLEDEAEKEQQKKTEDEYKPLVERIQAALGDSVKEVRVTHRLTDSPACLVAGEHDLSGNLERLLKA 561          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_FRATW (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 77/207 (37.20%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK--KLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            K +  K L   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK  K +                              K IK+VL                P C+V  +YG + +M+++M+
Sbjct:  351 KAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMME 557          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_FRATT (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 77/207 (37.20%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK--KLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            K +  K L   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK  K +                              K IK+VL                P C+V  +YG + +M+++M+
Sbjct:  351 KAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMME 557          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_FRATN (Chaperone protein htpG OS=Francisella tularensis subsp. novicida (strain U112) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 77/207 (37.20%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK--KLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            K +  K L   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK  K +                              K IK+VL                P C+V  +YG + +M+++M+
Sbjct:  351 KAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDKFETPENKEKFEKETKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMME 557          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 77/207 (37.20%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK--KLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 606
            K +  K L   +++A ++KE Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY++RMKEGQ+ IYYIT +S KA  N+P LE  KKKG EV+ M D IDE+ +  L EF+GK  K +                              K IK+VL                P C+V  +YG + +M+++M+
Sbjct:  351 KAITTKILSELKKLASKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQSGDSKQTVSLADYISRMKEGQDTIYYITSDSYKAAANNPQLEAFKKKGIEVILMTDRIDEWMMSTLTEFDGKHMKSIIKGDIDLDRFETPENKEKFEKEAKDFEKVLKEIKEVLKDKVEDVRLSKRLTDSPSCVVVNDYGMSLHMQKMME 557          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 65/131 (49.62%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    1 KNLVKKCLELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 390
            KN+  K L   +++  + +  Y  F+  F   LK G+  D+ NK KL +LL +HST S D++T++ +YV RMKE Q DIYYITG+S   V NSP+LEKLK+KG+EVL +VD +DE+ V  L EF+GKKL S
Sbjct:  344 KNVTNKALSTLKDLLTKERSAYEDFWTEFGATLKEGLPSDAANKEKLQDLLLFHSTSS-DKMTTMDEYVARMKETQKDIYYITGDSLSQVSNSPYLEKLKEKGFEVLLLVDPVDEWVVDALSEFKGKKLQS 473          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_GEOUR2.934e-3240.87Chaperone protein htpG OS=Geobacter uraniireducens... [more]
H90B3_HUMAN7.226e-3143.64Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
ENPL_DICDI4.684e-3037.98Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_THIDA7.989e-3040.49Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_METFK7.989e-3038.54Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_FRATW1.780e-2937.20Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATT1.780e-2937.20Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATN1.780e-2937.20Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAT11.780e-2937.20Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_BDEBA1.780e-2949.62Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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