FC931602

Overview
NameFC931602
Unique NameFC931602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 78/208 (37.50%), Postives = 104/208 (50.00%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-----KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT--XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            KK L L + +A +     +E Y  F++ F   LK G+ ED  NK K+A LLR+ ST +   DE+ SL DY+ RMKEGQ+ IYY+T ES  A +NSP LE  +KKG EVL + D +DE+ +G L EF+GK LVS                               + +K  LG               P CLV  E+    N+ RI+KA
Sbjct:  367 KKVLGLLESLATSDEAADREKYATFWKEFGPVLKEGVGEDFANKDKIAGLLRFASTHADTPDEVVSLADYLARMKEGQDKIYYVTAESFNAAKNSPHLEIFRKKGIEVLLLTDRVDEWVIGNLPEFDGKALVSVAKGGLDLGKLEDEAEKKETEKAADEYKELLEKMKASLGERVKEVRVTHRLTDSPACLVADEHDVGMNLARILKA 574          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 78/208 (37.50%), Postives = 102/208 (49.04%), Query Frame = 1
Query:    1 KNLVKKCLELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS---ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            K+LV K L    E+ E N ++Y  F++ F   LK G+H D  NK KL EL  + ST +     TSLK+YV RM E Q +IY+ITG+S+  ++ SP LE  K KGYEVL++ D +DE+ V  L E++ KKL +                                  IK  L                 CCLV  EYG  ANMERI+KA
Sbjct:  362 KSLVGKILSTLAEVKEKNFDEYVNFWKEFGPVLKEGLHFDYANKEKLQELALFESTATEAGSFTSLKEYVERMPEAQQEIYFITGDSRATLKISPHLEAFKAKGYEVLFLTDPVDEWVVQALTEYKEKKLKAVDRGDVDLDSEEEKKEKETKQEEARKEYGDLISFIKSHLEDRVKDARLSKRLTDSACCLVADEYGINANMERILKA 569          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 78/202 (38.61%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            K+ L + +++A N KE Y KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A
Sbjct:  354 KRVLSMLEKMATNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFTGKKLQSIS-KGKVELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 78/202 (38.61%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            K+ L + +++A N KE Y KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A
Sbjct:  354 KRVLSMLEKMATNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKVELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 78/202 (38.61%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            K+ L + +++A N KE Y KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A
Sbjct:  354 KRVLSMLEKMATNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKIELGDDETSEQIKEQEKTLEPLIKHIKSVLNDRVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 77/202 (38.12%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   13 KKCLELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            K+ L + +++A N KE Y KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++Y++RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A
Sbjct:  354 KRVLSMLEKMATNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYISRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKIELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 73/205 (35.61%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   10 VKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX--CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 609
            VK+ L+  + +A+N+ EDY  F+++F +  K GI ED  N+ ++A LLR+ ST    E    SL DYV RMK+GQ  IYY+T ES  A  NSP LE  ++ G EVL + D +DE+ V  L E++GK+L S                              CK + + LG               P CLV GEY +   M+R+++A
Sbjct:  362 VKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAHLHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGMQRLLQA 566          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 61/130 (46.92%), Postives = 91/130 (70.00%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 387
            L K+ L++ +++A++  EDY  F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V
Sbjct:  360 LSKRALDMLEKLAKDAPEDYKTFWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALTDYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFV 489          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 61/130 (46.92%), Postives = 91/130 (70.00%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 387
            L K+ L++ +++A++  EDY  F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V
Sbjct:  361 LSKRALDMLEKLAKDAPEDYKTFWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALADYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFV 490          
BLAST of FC931602 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = 1
Query:    7 LVKKCLELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLV 387
            L K+ L++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V
Sbjct:  358 LTKRVLDMLEKLAKNEPEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRFASTGDDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPEFDGKQFV 487          
The following BLAST results are available for this feature:
BLAST of FC931602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 371
Match NameE-valueIdentityDescription
HTPG_AZOSE2.176e-2737.50Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]
HTPG_PELPD3.711e-2737.50Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_LEGPL3.711e-2738.61Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPH3.711e-2738.61Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPA3.711e-2738.61Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPC4.847e-2738.12Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_HALHL4.847e-2735.61Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_XYLFT1.080e-2646.92Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_XYLFA1.080e-2646.92Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HTPG_PSEAE1.080e-2648.46Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]

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Properties
Property NameValue
Genbank descriptionC34107A02EF PostHarvP1 Citrus clementina cDNA clone C34107A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931602 ID=FC931602; Name=FC931602; organism=Citrus clementina; type=EST; length=695bp
AAGAACTTGGTGAAGAAGTGCCTTGAGCTCTTCCAAGAGATTGCTGAGAA
CAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGC
TTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTC
CGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTA
TGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGTG
AGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACC
TTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGG
TGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCT
GCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATC
ATGAAGGCTCAGGCCTTGAGAGACACAGCATGGCTGGTTACATGTCCAGC
AAGAAGACCATGGAGATCAATCGGAGAACCCATCATGGAGGAGCT
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