FC931606

Overview
NameFC931606
Unique NameFC931606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis GN=RRI1 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.101e-69
Identity = 127/204 (62.25%), Postives = 157/204 (76.96%), Query Frame = 3
Query:   84 SMDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGD--AIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGY 689
            S  +S+A+  +EL N I+     P +ST      D+IF YD  AQ      +PW  DPH+F++V+ISA+AL+KMV+HARSGG  E+MGLMQGK D +   + VMD+FALPVEGTETRVNAQ +AYEYMV Y   +K+ GRLEN VGWYHSHPGYGCWLSGIDV+TQ  NQQFQ+PF+A+VIDP RT+S+GKV+IGAFRT+PEGY
Sbjct:    7 SSSASMARANFELNNAII-----PLSSTT----LDSIFAYDNEAQRAILHAQPWKTDPHFFQKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFRTFPEGY 201          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans GN=rri1 PE=1 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 7.211e-66
Identity = 123/201 (61.19%), Postives = 149/201 (74.13%), Query Frame = 3
Query:  102 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704
            AQ +WELEN +  ++             D+++ YDE         +PW  DPHYFK V+ISA+ALLKMV+HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ ++AGR+ENAVGWYHSHPGYGCWLSGIDVSTQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP E
Sbjct:    4 AQLSWELENAVTLIDPQ----------RDSLYRYDEETHKYLSDTRPWTKDPHYFKSVRISAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKE 193          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae GN=RRI1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.606e-65
Identity = 119/198 (60.10%), Postives = 144/198 (72.73%), Query Frame = 3
Query:  102 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXP 695
            A K WEL+NN+  ++             DA++ +D  AQ    +E+PW  DP +FK V+ISA AL+KM +HARSGG +EVMGLMQG T GD  IV DAF LPVEGTETRVNAQ +A EY+V+Y    +  GR EN VGWYHSHPGYGCWLSGIDV T+ + QQFQ+PFLAVVIDP RT+++GKV+IGAFRTYP  Y P
Sbjct:    5 ALKAWELDNNVQLVDPK----------RDALYNFDADAQKAINKEQPWKQDPSHFKHVRISATALIKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFRTYPADYKP 192          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_ASPFU (COP9 signalosome complex subunit 5 OS=Aspergillus fumigatus GN=csn5 PE=3 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.740e-65
Identity = 121/201 (60.20%), Postives = 148/201 (73.63%), Query Frame = 3
Query:  102 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704
            AQ++WELEN I  ++             DA++ YDE         +PW  DPHYFK ++ISA+AL+KM +HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ + AGR+ENAVGWYHSHPGYGCWLSGIDV+TQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP E
Sbjct:    4 AQQSWELENTISLIDPQ----------RDALYRYDEETHKALSAARPWAKDPHYFKSIRISAVALIKMTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM-QQLGGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKE 193          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica GN=RRI1 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.815e-64
Identity = 116/196 (59.18%), Postives = 142/196 (72.45%), Query Frame = 3
Query:  111 TWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPP 698
            T+++EN+IV +++ P          D ++ YD+  Q       PW  DP YF+ V +S++AL+KM +HARSGG IEVMG+M GK   +  +VMD + LPVEGTETRVNAQ +  E+MV+Y Q  K  GR EN VGWYHSHPGYGCWLSGIDV TQ  NQQFQEPFLAVV+DP RT+SAGKVEIGAFRTYP+ Y PP
Sbjct:    6 TFQVENDIVDVDSTPQQGFD----RDDLYKYDDVEQKAILAAHPWRTDPSYFRNVLVSSIALVKMAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDYKPP 197          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_NEUCR (COP9 signalosome complex subunit 5 OS=Neurospora crassa GN=rri-1 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63
Identity = 113/185 (61.08%), Postives = 136/185 (73.51%), Query Frame = 3
Query:  141 METPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXP 695
            ME PP     D    DA++ YD  A       +PW ND  YFK V+IS++A++KMV+HARSGG +EVMG+MQG  +G  +++ DA+ LPVEGTETRVNAQ +A EYMV+Y +  ++  RLEN +GWYHSHPGYGCWLSGIDV TQ L QQF EPF+AVVIDP RTVS  KVEIGAFRT PEG  P
Sbjct:    1 MELPPNPGLVDVQR-DALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSGGNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTIPEGIKP 184          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNE (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans GN=RRI1 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63
Identity = 120/202 (59.41%), Postives = 142/202 (70.30%), Query Frame = 3
Query:   93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPP 698
            +S A+KT+E+ NN+            D SA  AIF Y    +     E PW  DPHYF  VKISA+AL+KMV HARSGG  E+MG+M GK       +MD  ALPV+GTETRVNA  +A EYMV++   N +AG+ E   GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP
Sbjct:    2 ASTARKTFEINNNV---------QVVDPSA--AIFQYSREEEKLLDDEAPWRTDPHYFHTVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPP 192          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_DEBHA (COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii GN=RRI1 PE=3 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.913e-60
Identity = 109/185 (58.92%), Postives = 135/185 (72.97%), Query Frame = 3
Query:  147 TPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPD 701
            T   ++T     +D   F+   +     + +PW ++  YFK+  IS+LAL KM VHA+SGG IEVMG+M GK   ++IIVMD + LPVEGTETRVNAQA+ YEYMV Y + +KQ GR EN VGWYHSHPGYGCWLSGIDV+TQ LNQ FQ+P+LA+VIDP +T   GKVEIGAFRT+P+ Y  PD
Sbjct:   21 TQSLDATEIDKHADYESFFSINSDESIMKARPWKSNAKYFKKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFRTFPDNYKSPD 205          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_SCHPO (COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe GN=csn5 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.320e-51
Identity = 93/165 (56.36%), Postives = 121/165 (73.33%), Query Frame = 3
Query:  192 IFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG 686
            +F +DE  +    +E PW +DP +F+ VKISA+ALLKM+ H   G  +EVMG +QGK +G ++I++D+FALPVEGTETRVNA  +A EY V Y    K   R EN +GWYHSHP YGCWLSG+DV TQ  NQ++Q+PF+AVV+DP R++ +  V IGAFRTYP G
Sbjct:    8 VFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVG 172          
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_CANAL (COP9 signalosome complex subunit 5 OS=Candida albicans GN=RRI1 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 3
Query:  228 QQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAG---RLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 671
            + +KPW  D +YF +  IS+LAL+KM  HA++GG+IE+MG++ GK  G +IIVMD + LPVEGTETRVNAQ +AY YMV+Y    +Q       EN VGWYH HP YGCWL GIDVSTQ LNQ  Q+P+LA+V+DP +T+  GKVEIGAFR
Sbjct:   60 RDKKPWKQDVNYFNKCYISSLALMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQGKVEIGAFR 210          
The following BLAST results are available for this feature:
BLAST of FC931606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CSN5_USTMA9.101e-6962.25COP9 signalosome complex subunit 5 OS=Ustilago may... [more]
CSN5_EMENI7.211e-6661.19COP9 signalosome complex subunit 5 OS=Emericella n... [more]
CSN5_GIBZE1.606e-6560.10COP9 signalosome complex subunit 5 OS=Gibberella z... [more]
CSN5_ASPFU2.740e-6560.20COP9 signalosome complex subunit 5 OS=Aspergillus ... [more]
CSN5_YARLI8.815e-6459.18COP9 signalosome complex subunit 5 OS=Yarrowia lip... [more]
CSN5_NEUCR7.462e-6361.08COP9 signalosome complex subunit 5 OS=Neurospora c... [more]
CSN5_CRYNE7.462e-6359.41COP9 signalosome complex subunit 5 OS=Cryptococcus... [more]
CSN5_DEBHA5.913e-6058.92COP9 signalosome complex subunit 5 OS=Debaryomyces... [more]
CSN5_SCHPO1.320e-5156.36COP9 signalosome complex subunit 5 OS=Schizosaccha... [more]
CSN5_CANAL1.046e-4859.60COP9 signalosome complex subunit 5 OS=Candida albi... [more]

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Properties
Property NameValue
Genbank descriptionC34107A06EF PostHarvP1 Citrus clementina cDNA clone C34107A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931606 ID=FC931606; Name=FC931606; organism=Citrus clementina; type=EST; length=712bp
GGTTGGTGTTGTTGGTGTTCGTCTTGTTTGTTGTTCCAGACAGTGTAGGG
TGTAGGCAGAGAGGGAGAGAAAACAACATAGTATCGATGGACTCGTCAAT
AGCGCAAAAGACATGGGAACTGGAAAACAACATAGTATCGATGGAGACAC
CGCCGACAAACTCAACAGCCGACACGTCAGCATCGGACGCGATTTTCTTC
TACGACGAAGGGGCGCAGACCAAGTTCCAGCAAGAGAAGCCCTGGGTCAA
TGACCCTCACTACTTCAAGCGCGTGAAGATCTCCGCACTCGCCCTCCTCA
AGATGGTCGTCCATGCGCGATCCGGTGGGACCATCGAGGTCATGGGCCTT
ATGCAAGGCAAAACCGACGGCGACGCCATCATTGTCATGGACGCCTTTGC
TTTGCCCGTTGAAGGTACCGAAACCAGGGTTAATGCTCAGGCCGATGCTT
ATGAATATATGGTCGATTATTCCCAAACCAACAAACAGGCCGGACGTCTG
GAGAATGCTGTTGGGTGGTACCATTCACATCCTGGCTATGGATGCTGGCT
TTCGGGTATTGATGTTTCAACTCAAATGCTTAATCAGCAGTTTCAGGAGC
CATTTTTGGCTGTTGTGATTGATCCTACTAGGACTGTTTCTGCTGGGAAA
GTTGAGATTGGAGCTTTCAGGACGTATCCTGAAGGATACNAGCCTCCGGA
TGAACCCATCTC
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