FC931606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_ASHGO (COP9 signalosome complex subunit 5 OS=Ashbya gossypii GN=RRI1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.347e-46 Identity = 86/157 (54.78%), Postives = 115/157 (73.25%), Query Frame = 3 Query: 213 AQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 683 +Q + QQE W DP YF++ +SALA +K++ HA GG +EV+G++ G + I+V+D++ LPVEGTETRVNAQ ++YEY V Y +T G VGWYHSHPGYGCWLSGID TQ LNQ FQ+P+LA+V+DP R+ ++G ++IGAFRT PE Sbjct: 54 SQVRVQQEL-WKQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLETAVPEGLA--IVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPE 207
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_KLULA (COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis GN=RRI1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.113e-41 Identity = 84/189 (44.44%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 114 WELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYP 680 W N ++ ET +S++D+S + + + + +P +F++ IS LA KM+ HA GG IEVMG++ G T D I+V D ++LPV+GTETRVNA ++YEYMV Y + + + VGWYHSHPGYGCWLS ID+ TQ LNQ +Q+P+LA+V+DP +++S ++IGAFRT P Sbjct: 17 WIQANEDINTETS-LSSSSDSSTTIPVI---DHLPARIPYATDLKRNPCHFQKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQY--LDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTLP 199
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_CANGA (COP9 signalosome complex subunit 5 OS=Candida glabrata GN=RRI1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38 Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 3 Query: 249 NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY--SQTNKQAGRLE---NAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 683 N P +++ V +S LA K++ HA GG IEVMG++ G G+ ++ D F LPVEGTET VNA ++YEYMV + + R E N +GWYHSHPGY CWLS ID+ TQ LNQQ Q+P+LA+V+DP ++ + KV IG+FRTY + Sbjct: 66 NSPLFYQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQD 215
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_YEAST (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae GN=RRI1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 216 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 674 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS7 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain YJM789) GN=RRI1 PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 216 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 674 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS1 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 216 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 674 +TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27 Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 3 Query: 255 PHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKT-DGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 674 P + + IS+LALLKM+ HAR+G +EVMGLM G+ D I V+D FA+P GT V A ++ M+D KQ GR E +GWYHSHPG+GCWLS +DV+TQ +Q Q +AVV+DP ++V GKV I AFRT Sbjct: 25 PDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDML---KQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSV-RGKVVIDAFRT 162
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27 Identity = 68/144 (47.22%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 246 VNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 674 ++ P + V IS+LALLKM+ HARSG +EVMGLM G D I V D FA+P GT V + Y+ + K GR EN VGWYHSHPG+GCWLS +DV+TQ + +AVV+DP ++V GKV + AFR+ Sbjct: 20 LDHPDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVK-GKVMLDAFRS 160
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 273 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYXPPDEP 707 V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP ++V GKV I AFRT P+ EP Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVK-GKVVIDAFRTINPQSMALNQEP 176
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27 Identity = 68/137 (49.64%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 267 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 671 ++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+DP ++V GKV I AFR Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 161 The following BLAST results are available for this feature:
BLAST of FC931606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931606 ID=FC931606; Name=FC931606; organism=Citrus clementina; type=EST; length=712bpback to top |