FC931607

Overview
NameFC931607
Unique NameFC931607
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig789 contig Ccv1_Contig789:687..1337. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 414.461 bits (1064), Expect = 2.475e-115
Identity = 198/217 (91.24%), Postives = 214/217 (98.62%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            TPKYSK+R++EIVKEVSSYLKKVGYNP+K+ F+PISGFEGDNMI+RSTNLDWYKGPTLL+ALD I+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSK+DPA+EAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+E+ TKIDRRSGKEL
Sbjct:  159 TPKYSKSRFEEIVKEVSSYLKKVGYNPDKIAFIPISGFEGDNMIDRSTNLDWYKGPTLLEALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKEL 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 3.232e-115
Identity = 199/217 (91.71%), Postives = 213/217 (98.16%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            TPKYSK+RYDEIVKEVSSYLKKVGYNP+KVPFVPISGFEGDNMIERS+NLDWYKGPTLL+ALD INEPKRPS+KPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+GLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSK+DPA+EAANFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKF+E+ TKIDRRSGKEL
Sbjct:  159 TPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSSNLDWYKGPTLLEALDQINEPKRPSEKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKEL 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 7.201e-115
Identity = 198/217 (91.24%), Postives = 211/217 (97.24%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            TPKYSK RY+EIVKEVSSYLK+VGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+GLTTEVKSVEMHHEAL EALPGDNV FNVKNVAVKDLK G VASNSK+DPA++AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EL+TKIDRRSGKE+
Sbjct:  159 TPKYSKGRYEEIVKEVSSYLKEVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFAPTGLTTEVKSVEMHHEALTEALPGDNVRFNVKNVAVKDLKHGLVASNSKDDPAKDAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKEI 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 1.228e-114
Identity = 198/217 (91.24%), Postives = 212/217 (97.70%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            TPKYSK+RYDEIVKEVSSYLKKVGYNP+KVPFVPISGFEGDNMIERS+NLDWYKGPTLL+ALD INEPKRPSDKPL LPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFGP+GLTTEVKSVE+HHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSK+DPA+EAANFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKF+E+ TKIDRRSGKEL
Sbjct:  159 TPKYSKSRYDEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSSNLDWYKGPTLLEALDQINEPKRPSDKPLHLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEVHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKEL 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 9.131e-102
Identity = 177/217 (81.57%), Postives = 197/217 (90.78%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            T KYS+ARY+EI KEVS YLKKVGYNPEKVPF+PISG+ GDNMIE S N+ WYKG TL+ ALDN+  PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG VVTF P+ LTTEVKSVEMHHEAL EA+PGDNVGFNVKNV+VKD++RG+VASN+K DPA+EAA+FT+QVII+NHPGQIGNGYAPVLDCHT HIA KF+ + TKIDRRSGKEL
Sbjct:  159 TVKYSQARYEEIKKEVSGYLKKVGYNPEKVPFIPISGWNGDNMIEASENMGWYKGLTLIGALDNLEPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGDVVTFAPNNLTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDIRRGYVASNAKNDPAKEAADFTAQVIILNHPGQIGNGYAPVLDCHTCHIACKFATIQTKIDRRSGKEL 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3)

HSP 1 Score: 350.903 bits (899), Expect = 3.361e-96
Identity = 167/217 (76.96%), Postives = 191/217 (88.02%), Query Frame = 1
Query:    1 TPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            T  Y + RYDEIVKEVS+Y+KKVGYN EKV FVPISG++GDNMIE+S  + WYKGPTLL+ALD +  P RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPG VVTF P+ +TTEVKS+EMHHE L EA PGDNVGFNVKNV+VKD++RG V  N+K DP +EAA+FT+QVII+NHPGQIGNGYAPVLDCHTSHIA KF+E+ +KIDRRSGKEL
Sbjct:  159 TVNYGQERYDEIVKEVSAYIKKVGYNVEKVRFVPISGWQGDNMIEKSEKMPWYKGPTLLEALDMLEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGDVVTFAPANVTTEVKSIEMHHEQLAEATPGDNVGFNVKNVSVKDIRRGNVCGNTKNDPPKEAADFTAQVIILNHPGQIGNGYAPVLDCHTSHIACKFAEIESKIDRRSGKEL 375          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.408e-94
Identity = 160/211 (75.83%), Postives = 188/211 (89.10%), Query Frame = 1
Query:   10 YSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSG 642
            YS+ARYDEIVKEVSS++KK+GYNPEKV FVPISG+ GDNM+ERS  ++WYKGPTLL+ALD I EPKRP DKPLR+PLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GL+TEVKSVEMHHE L EA PGDNVGFNVKNV+VK++KRG VA +SK DP +E   F +QVI++NHPGQI  GY+PVLDCHT+HIA KF+E+V K+DRR+G
Sbjct:  162 YSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKMEWYKGPTLLEALDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTG 372          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.254e-92
Identity = 159/215 (73.95%), Postives = 188/215 (87.44%), Query Frame = 1
Query:    7 KYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            KYS+ R++EI  EVS YLK VGYNPEKVPFVPISGF GDNM+ERS+N+ WYKG  L++ALDN+  PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P+GL TEVKSVEMHH  L++A+PGDNVGFNVKNV+VKD+KRG VAS+SK DPA+ AA+F +QVI+++HPGQI  GY+PV+DCHT+HIA KF+ L  ++DRRSGK L
Sbjct:   58 KYSETRFNEIQAEVSRYLKTVGYNPEKVPFVPISGFMGDNMVERSSNMPWYKGKILVEALDNVEPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVCFAPTGLQTEVKSVEMHHTQLEQAVPGDNVGFNVKNVSVKDVKRGHVASDSKNDPAKAAASFQAQVIVLHHPGQINPGYSPVVDCHTAHIACKFAVLEKRLDRRSGKAL 272          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.022e-92
Identity = 161/227 (70.93%), Postives = 193/227 (85.02%), Query Frame = 1
Query:    7 KYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            K+S+ R++EI+KEVS ++KK+G+NP+ VPFVPISG+ GDNM+E STN+ WYKG             TLLDA+D I+ P+RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GMVVTF P+ +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK DPA+EA +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KF+EL+ KIDRRSGK+L
Sbjct:  159 KWSEQRFNEIIKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAKSGKTLLDAIDAIDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKL 385          
BLAST of FC931607 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 8.566e-92
Identity = 158/228 (69.30%), Postives = 190/228 (83.33%), Query Frame = 1
Query:    4 PKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG------------PTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 651
            P +S+AR+ E+  EVS+Y+KK+GYNP+ +PFVPISGF GDNM+E S N+ W+KG             TLL+ALD++  P+RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTF P  LTTEVKSVEMHHEALQEALPGDNVGFNVKN+++KD++RG VAS+SK DPA+E   FT+QVIIMNHPGQI  GY PVLDCHT+HIA KF+EL  K+DRRSGK++
Sbjct:  160 PPFSEARFGEVTTEVSNYIKKIGYNPKSIPFVPISGFNGDNMLEPSANMPWFKGWSVERKEGTMTGKTLLEALDSVVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKV 387          
The following BLAST results are available for this feature:
BLAST of FC931607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A2_DAUCA2.475e-11591.24Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A2_HORVU3.232e-11591.71Elongation factor 1-alpha OS=Hordeum vulgare GN=BL... [more]
EF1A_PEA7.201e-11591.24Elongation factor 1-alpha OS=Pisum sativum PE=2 SV... [more]
EF1A1_HORVU1.228e-11491.24Elongation factor 1-alpha OS=Hordeum vulgare PE=1 ... [more]
EF1A_EUGGR9.131e-10281.57Elongation factor 1-alpha OS=Euglena gracilis GN=T... [more]
EF1A_TRYBB3.361e-9676.96Elongation factor 1-alpha OS=Trypanosoma brucei br... [more]
EF1A_DICDI2.408e-9475.83Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A_EIMBO2.254e-9273.95Elongation factor 1-alpha (Fragment) OS=Eimeria bo... [more]
EF1A_ABSGL5.022e-9270.93Elongation factor 1-alpha OS=Absidia glauca GN=TEF... [more]
EF1A_ONCVO8.566e-9269.30Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]

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Properties
Property NameValue
Genbank descriptionC34107A07EF PostHarvP1 Citrus clementina cDNA clone C34107A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931607 ID=FC931607; Name=FC931607; organism=Citrus clementina; type=EST; length=651bp
ACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTC
TTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGC
CCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACAAACCTT
GACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATGA
GCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGT
ACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGT
GTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACAAC
TGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTC
CGGGTGACAATGTTGGCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTC
AAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAGGATCCGGCCAGGGAAGC
TGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGATTG
GAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGTC
AAGTTTTCTGAGCTCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCT
T
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