FC931608

Overview
NameFC931608
Unique NameFC931608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15358 contig Ccv1_Contig15358:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 93/148 (62.84%), Postives = 108/148 (72.97%), Query Frame = 3
Query:   87 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKIL 530
            EV L+TSMGS  +ELY+ H+PRTC+NF EL++RGYY+   FHRII DF++Q            SIYG  F DEI P L+HTGAGILSMANAGPNTNGSQFFITL P   LDGKHTIFGRV  GM V+KR+G V+TD +DR     KIL
Sbjct:    6 EVILDTSMGSIHIELYWDHAPRTCKNFYELAKRGYYDGVSFHRIIADFMIQGGDPTGTGRGGTSIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVKRMGLVKTDANDRLFIVQKIL 153          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45
Identity = 85/150 (56.67%), Postives = 116/150 (77.33%), Query Frame = 3
Query:   90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTS 539
            VTL+T++G  T+ELYY H+P+ C+NF ELS+RGYY+N+ FHR+IKDF++Q            SIYG  FEDEI  ELKHTGAGILSMAN+G N+NGSQFFIT  P   LDGKHTIFGRV  GM+V++++ ++QT+ +D+PI +++I++ +
Sbjct:    6 VTLQTTVGDITLELYYNHAPKACKNFYELSKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQTN-NDKPIDEIRIIKAT 154          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44
Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 3
Query:   90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 533
            V L+TS+G   +ELY +H+P+TC+NF  L++ GYY+   FHR+I DF++Q            SIYG  F+DEI  +L HTGAGILSMANAGPNTN SQFFITL P   LDGKHTIFGRV  G+ V KR+G ++TD  DRPI  +KI++
Sbjct:    4 VELQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKIIK 151          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 3
Query:   45 KATIKMLASDDGPPEVT----LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSVK 545
            K  +      +GP  V+    + TSMG   ++L+    P+T  NF   SR GYYN   FHRIIK F++Q            SI+G  FEDE    L+H     LSMANAG NTNGSQFFIT+ P   LD KHT+FGRV +GMEV++R+ +V+ + K D+P  DV I+  +VK
Sbjct:  473 KEEVMAATQAEGPKRVSDSAIIHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 644          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34
Identity = 77/172 (44.77%), Postives = 100/172 (58.14%), Query Frame = 3
Query:   45 KATIKMLASDDGPPEVT----LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSVK 545
            K  +      +GP  V+    + TSMG    +L+    P+T  NF   SR GYYN   FHRIIK F++Q            SI+G  FEDE    L+H     LSMANAG NTNGSQFFIT+ P   LD KHT+FGRV +GMEV++R+ +V+ + K D+P  DV I+  +VK
Sbjct:  475 KEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 646          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34
Identity = 77/172 (44.77%), Postives = 100/172 (58.14%), Query Frame = 3
Query:   45 KATIKMLASDDGPPEVT----LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSVK 545
            K  +      +GP  V+    + TSMG    +L+    P+T  NF   SR GYYN   FHRIIK F++Q            SI+G  FEDE    L+H     LSMANAG NTNGSQFFIT+ P   LD KHT+FGRV +GMEV++R+ +V+ + K D+P  DV I+  +VK
Sbjct:  475 KEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK 646          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 69/142 (48.59%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  102 TSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            T+ G+  VEL+    P+TC NF EL++ GYYN+  FHR IK F++Q            SI+   F DEIK  LKH   G+LSMAN G +TNGSQFFIT   A HLDG HT+FG+V  G++V+ +L S+  D+ DRP  ++KI
Sbjct:  292 TNYGNINVELFSDKKPKTCHNFIELAKTGYYNDVIFHRNIKKFMIQGGDPTGTGKGGESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLESIPVDEKDRPEREIKI 433          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33
Identity = 76/172 (44.19%), Postives = 101/172 (58.72%), Query Frame = 3
Query:   45 KATIKMLASDDGPPEVT----LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSVK 545
            K  +      +GP  V+    + TSMG   ++L+    P+T  NF   SR GYYN   FHRIIK F++Q            SI+G  FEDE    L+H     LSMANAG NTNGSQFFIT+ P   LD KHT+FGRV +GMEV++R+ +V+ + + D+P  DV I+  +VK
Sbjct:  475 KEEVMAATQAEGPKRVSDSAIVHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRIFNVKVNPQTDKPYEDVSIINITVK 646          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32
Identity = 68/152 (44.74%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSV 542
            V L T+ G   +EL+   +P+TC NF +L ++ YY+ + FHR I++F++Q            S +G  F+DE +P L HTG G+LSMAN+GPNTN SQFFIT    ++LD KHTIFGRV  G + +  + +V++D K DRP  +V I  T+V
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLICTTTV 433          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 68/152 (44.74%), Postives = 98/152 (64.47%), Query Frame = 3
Query:   90 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD-KDDRPIHDVKILRTSV 542
            V L T+ G   +EL+   +P+TC NF  L ++ YY+ + FHR I++F++Q            S +G  F+DE +P L HTG GILSMAN+GPN+N SQFFIT    ++LD KHTIFGRV  G +V+  + +V++D K DRP  +++I  T+V
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 433          
The following BLAST results are available for this feature:
BLAST of FC931608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIL1_RHIOR5.647e-4762.84Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
CYPE_DICDI1.391e-4556.67Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL1_SCHPO4.474e-4456.08Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPWD1_BOVIN2.461e-3444.77Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_PONAB5.482e-3444.77Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN5.482e-3444.77Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL2_RHIOR7.160e-3448.59Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPWD1_MOUSE2.083e-3344.19Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL2_MOUSE1.764e-3244.74Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN2.303e-3244.74Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionC34107A08EF PostHarvP1 Citrus clementina cDNA clone C34107A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931608 ID=FC931608; Name=FC931608; organism=Citrus clementina; type=EST; length=705bp
GATCGTTGTTTCGTTTCTGAGTTTCTGATAGTGTTGTGGTCTTGAAAGCA
ACAATAAAGATGCTGGCAAGTGACGACGGTCCGCCGGAGGTCACTTTAGA
AACTTCCATGGGCTCTTTCACCGTCGAGCTTTACTACAAGCACTCTCCAA
GAACTTGCAGGAACTTTGCTGAACTATCTCGCAGAGGTTATTATAATAAC
AGCAAATTCCACAGAATTATTAAGGATTTTATAGTTCAAGGTGGAGATCC
TACCGGGACTGGAAGGGGAGGAGATTCCATATATGGCCATGTTTTCGAAG
ATGAAATAAAACCAGAATTAAAGCATACTGGAGCTGGGATCTTGTCCATG
GCAAATGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATCACTTTGAC
GCCTGCTTCACATCTGGATGGAAAGCACACTATATTTGGAAGAGTATGCA
GAGGAATGGAAGTGATCAAAAGGCTTGGCAGTGTCCAAACTGATAAAGAT
GACAGGCCCATCCATGACGTGAAGATACTACGGACTTCTGTTAAGGACTG
ATGCCATGAAACGGTTATGGAAACCAACGTTTCCACATGATTTTGGGTGC
ACTAGAGCCAGTGTTCAAAAATCTGATTCTGAAAATTTCTAACGTCTGAT
TTTGGATGCACTGTACTTTGGTATTTTATTGAACAGAAGGCAAATATGGA
TCATT
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