FC931608

Overview
NameFC931608
Unique NameFC931608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22
Identity = 61/129 (47.29%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSV 485
            G   +EL     PRT  NF  L    RG+ Y+N  FHR+I  F+ Q             SIYG  F+DE   +L+H G G+LSMAN+GPNTNGSQFFI  T    LDGKH +FGRV  G  V+K++ SV
Sbjct:  126 GRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESV 253          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22
Identity = 63/153 (41.18%), Postives = 81/153 (52.94%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAELSRRGY------------YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKD-DRPIHDVKI 527
            G    ELY    P+T  NF +L                 Y  S FHR+IKDF+ Q             SIY   FEDE    +KH    +LSMANAGPNTNGSQ FIT  P  HLDGKH +FG V +G  +++ + + Q D++ ++P+ DVKI
Sbjct:   18 GRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDE-NFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKI 169          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22
Identity = 63/139 (45.32%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAEL----------SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD 494
            G   +EL+   +PRT  NF  L           +  +Y  S FHRII  F+ Q             SIYG  FEDE   +LKHTG GILSMAN+GPNTNGSQFFI     S LDGKH +FG+V  G  V+K +  V +D
Sbjct:   18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSD 155          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22
Identity = 51/117 (43.59%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   96 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRV 446
            + T+ G   +EL  +++P+   NF +L+++GYY +  FHR IK F++Q            SI+G  F DE +  LKH   G LSMAN G NTN SQFFI      HL+ KHTIFG V
Sbjct:  304 ISTTSGDINLELQTEYAPKAVWNFIKLAKKGYYKDVTFHRNIKGFMIQGGDPSGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHV 420          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  108 MGSFTVELYYKHSPRTCRNFAEL---------SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHV-FEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            +G   +EL+   +PRT  NF             +   Y NSKFHR+IKDF++Q             +IYG   F DE    LKH  AG+LSMAN+GPNTNG QFFIT T    L+GKH +FG+V  GM++++ + + +T + D+P  DV I
Sbjct:   27 LGRIKMELFADVTPRTAENFRRFCTGESKNSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADE-NFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRTIR-DKPSQDVII 175          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22
Identity = 61/127 (48.03%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G    EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVCFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAM 142          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22
Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSV 485
            G    +L+    P+T +NF  L    +G+ Y  SKFHR+I  F++Q             SIYG  F DE   +LKH+  G+LSMANAGPNTNGSQFFIT  P S LDG H +FG+V + ME++ ++ S+
Sbjct:   15 GRIEFQLFEDVVPKTAKNFRALCTGEQGFGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADE-NFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESL 142          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22
Identity = 61/175 (34.86%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   87 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITL---TPAS-------------------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 527
            ++ + T+ G  T +L    +P+T  NF   ++ GYYN   FHR+I DF+VQ            SIYG  FEDE   E  +   G LSMANAGP+TNGSQFFI      P S                          LD KHT+FG++  G + ++ + + +    D+P+HD+ I
Sbjct:   17 KLIMHTNKGDMTFKLLPDVAPKTVENFVTHAKNGYYNGVTFHRVINDFMVQGGDPTATGMGGESIYGEPFEDEFSKEAFNI-YGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTLEDIANTKVGPQDKPLHDITI 190          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 3
Query:   96 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRV 446
            + T+ G   +EL+ +++P+   NF +L+++GYY +  FHR IK F++Q            SI+G  F DE +  LKH   G LSMAN G NTN SQFFI      HL+ KHTIFG V
Sbjct:  315 ISTTSGDINLELHTEYAPKAVWNFIKLAKKGYYKDVTFHRNIKGFMIQGGDPTGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHV 431          
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/129 (47.29%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  111 GSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRLGSV 485
            G   +EL     PRT  NF  L    RG+ Y+N  FHR+I  F+ Q             SIYG  F+DE   +L+H G G+LSMAN+GPNTNGSQFFI  T    LDGKH +FGRV  G  V+K++ SV
Sbjct:   32 GRIVMELRSDIVPRTAENFRALCTGDRGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESV 159          
The following BLAST results are available for this feature:
BLAST of FC931608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIE_SCHMA4.814e-2247.29Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPID_YEAST4.814e-2241.18Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
CP19C_ARATH4.814e-2245.32Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIL2_ASPOR6.287e-2243.59Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIH_ASPFU6.287e-2241.72Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIA_RAT6.287e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA2_RHIOR6.287e-2244.96Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPI1_STAS16.287e-2234.86Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_EMENI8.211e-2243.59Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]
PPIE_SCHJA8.211e-2247.29Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionC34107A08EF PostHarvP1 Citrus clementina cDNA clone C34107A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931608 ID=FC931608; Name=FC931608; organism=Citrus clementina; type=EST; length=705bp
GATCGTTGTTTCGTTTCTGAGTTTCTGATAGTGTTGTGGTCTTGAAAGCA
ACAATAAAGATGCTGGCAAGTGACGACGGTCCGCCGGAGGTCACTTTAGA
AACTTCCATGGGCTCTTTCACCGTCGAGCTTTACTACAAGCACTCTCCAA
GAACTTGCAGGAACTTTGCTGAACTATCTCGCAGAGGTTATTATAATAAC
AGCAAATTCCACAGAATTATTAAGGATTTTATAGTTCAAGGTGGAGATCC
TACCGGGACTGGAAGGGGAGGAGATTCCATATATGGCCATGTTTTCGAAG
ATGAAATAAAACCAGAATTAAAGCATACTGGAGCTGGGATCTTGTCCATG
GCAAATGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATCACTTTGAC
GCCTGCTTCACATCTGGATGGAAAGCACACTATATTTGGAAGAGTATGCA
GAGGAATGGAAGTGATCAAAAGGCTTGGCAGTGTCCAAACTGATAAAGAT
GACAGGCCCATCCATGACGTGAAGATACTACGGACTTCTGTTAAGGACTG
ATGCCATGAAACGGTTATGGAAACCAACGTTTCCACATGATTTTGGGTGC
ACTAGAGCCAGTGTTCAAAAATCTGATTCTGAAAATTTCTAACGTCTGAT
TTTGGATGCACTGTACTTTGGTATTTTATTGAACAGAAGGCAAATATGGA
TCATT
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