FC931608

Overview
NameFC931608
Unique NameFC931608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
[Close]
BLAST of FC931608 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22
Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:  108 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLTPASHLDGKHTIFGRVCRGMEVIKRL 476
            +G  + EL+    P+T  NF  LS   +G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI       LDGKH +FG+V  GM +++ +
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAM 142
The following BLAST results are available for this feature:
BLAST of FC931608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIA_PONPY8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO8.211e-2248.03Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]

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Properties
Property NameValue
Genbank descriptionC34107A08EF PostHarvP1 Citrus clementina cDNA clone C34107A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931608 ID=FC931608; Name=FC931608; organism=Citrus clementina; type=EST; length=705bp
GATCGTTGTTTCGTTTCTGAGTTTCTGATAGTGTTGTGGTCTTGAAAGCA
ACAATAAAGATGCTGGCAAGTGACGACGGTCCGCCGGAGGTCACTTTAGA
AACTTCCATGGGCTCTTTCACCGTCGAGCTTTACTACAAGCACTCTCCAA
GAACTTGCAGGAACTTTGCTGAACTATCTCGCAGAGGTTATTATAATAAC
AGCAAATTCCACAGAATTATTAAGGATTTTATAGTTCAAGGTGGAGATCC
TACCGGGACTGGAAGGGGAGGAGATTCCATATATGGCCATGTTTTCGAAG
ATGAAATAAAACCAGAATTAAAGCATACTGGAGCTGGGATCTTGTCCATG
GCAAATGCTGGTCCAAATACAAATGGAAGCCAGTTCTTTATCACTTTGAC
GCCTGCTTCACATCTGGATGGAAAGCACACTATATTTGGAAGAGTATGCA
GAGGAATGGAAGTGATCAAAAGGCTTGGCAGTGTCCAAACTGATAAAGAT
GACAGGCCCATCCATGACGTGAAGATACTACGGACTTCTGTTAAGGACTG
ATGCCATGAAACGGTTATGGAAACCAACGTTTCCACATGATTTTGGGTGC
ACTAGAGCCAGTGTTCAAAAATCTGATTCTGAAAATTTCTAACGTCTGAT
TTTGGATGCACTGTACTTTGGTATTTTATTGAACAGAAGGCAAATATGGA
TCATT
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